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Line 1: |
| | [[Category:Pathway]] | | [[Category:Pathway]] |
| − | == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-1042 PWY-1042] == | + | == Pathway [http://metacyc.org/META/NEW-IMAGE?object=XYLCAT-PWY XYLCAT-PWY] == |
| | * taxonomic range: | | * taxonomic range: |
| − | ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090] | + | ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751] |
| | + | ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] |
| | * common name: | | * common name: |
| − | ** glycolysis IV (plant cytosol) | + | ** xylose degradation I |
| | * Synonym(s): | | * Synonym(s): |
| − | ** glycolysis 4 | + | ** xylose catabolism |
| | | | |
| | == Reaction(s) found == | | == Reaction(s) found == |
| − | '''9''' reactions found over '''10''' reactions in the full pathway | + | '''1''' reactions found over '''2''' reactions in the full pathway |
| − | * [[2.7.1.90-RXN]] | + | * [[XYLULOKIN-RXN]] |
| − | ** 1 associated gene(s): | + | ** 3 associated gene(s): |
| − | *** [[Tiso_gene_596]] | + | *** [[Tiso_gene_15823]] |
| − | ** 2 reconstruction source(s) associated:
| + | *** [[Tiso_gene_15822]] |
| − | *** [[annotation-experimental_annotation]] | + | *** [[Tiso_gene_14270]] |
| − | *** [[annotation-in-silico_annotation]] | + | ** 3 reconstruction source(s) associated: |
| − | * [[2PGADEHYDRAT-RXN]] | + | |
| − | ** 4 associated gene(s): | + | |
| − | *** [[Tiso_gene_14718]]
| + | |
| − | *** [[Tiso_gene_8720]]
| + | |
| − | *** [[Tiso_gene_5619]]
| + | |
| − | *** [[Tiso_gene_13317]]
| + | |
| − | ** 7 reconstruction source(s) associated:
| + | |
| − | *** [[annotation-experimental_annotation]]
| + | |
| − | *** [[orthology-esiliculosus]]
| + | |
| − | *** [[annotation-in-silico_annotation]]
| + | |
| | *** [[orthology-athaliana]] | | *** [[orthology-athaliana]] |
| − | *** [[orthology-synechocystis]]
| |
| − | *** [[manual-primary_network]]
| |
| − | *** [[orthology-creinhardtii]]
| |
| − | * [[3PGAREARR-RXN]]
| |
| − | ** 16 associated gene(s):
| |
| − | *** [[Tiso_gene_2667]]
| |
| − | *** [[Tiso_gene_9922]]
| |
| − | *** [[Tiso_gene_15048]]
| |
| − | *** [[Tiso_gene_2841]]
| |
| − | *** [[Tiso_gene_14530]]
| |
| − | *** [[Tiso_gene_16754]]
| |
| − | *** [[Tiso_gene_2365]]
| |
| − | *** [[Tiso_gene_16271]]
| |
| − | *** [[Tiso_gene_5468]]
| |
| − | *** [[Tiso_gene_20311]]
| |
| − | *** [[Tiso_gene_14664]]
| |
| − | *** [[Tiso_gene_15391]]
| |
| − | *** [[Tiso_gene_14212]]
| |
| − | *** [[Tiso_gene_10516]]
| |
| − | *** [[Tiso_gene_9923]]
| |
| − | *** [[Tiso_gene_7201]]
| |
| − | ** 7 reconstruction source(s) associated:
| |
| − | *** [[annotation-experimental_annotation]]
| |
| − | *** [[orthology-esiliculosus]]
| |
| | *** [[annotation-in-silico_annotation]] | | *** [[annotation-in-silico_annotation]] |
| − | *** [[orthology-athaliana]]
| |
| − | *** [[orthology-synechocystis]]
| |
| − | *** [[manual-primary_network]]
| |
| − | *** [[orthology-creinhardtii]]
| |
| − | * [[6PFRUCTPHOS-RXN]]
| |
| − | ** 2 associated gene(s):
| |
| − | *** [[Tiso_gene_5733]]
| |
| − | *** [[Tiso_gene_596]]
| |
| − | ** 6 reconstruction source(s) associated:
| |
| − | *** [[annotation-experimental_annotation]]
| |
| | *** [[orthology-esiliculosus]] | | *** [[orthology-esiliculosus]] |
| − | *** [[annotation-in-silico_annotation]]
| |
| − | *** [[orthology-athaliana]]
| |
| − | *** [[manual-primary_network]]
| |
| − | *** [[orthology-creinhardtii]]
| |
| − | * [[F16ALDOLASE-RXN]]
| |
| − | ** 6 associated gene(s):
| |
| − | *** [[Tiso_gene_65]]
| |
| − | *** [[Tiso_gene_9119]]
| |
| − | *** [[Tiso_gene_9179]]
| |
| − | *** [[Tiso_gene_12272]]
| |
| − | *** [[Tiso_gene_14568]]
| |
| − | *** [[Tiso_gene_9118]]
| |
| − | ** 5 reconstruction source(s) associated:
| |
| − | *** [[annotation-in-silico_annotation]]
| |
| − | *** [[manual-primary_network]]
| |
| − | *** [[orthology-creinhardtii]]
| |
| − | *** [[orthology-esiliculosus]]
| |
| − | *** [[annotation-experimental_annotation]]
| |
| − | * [[GAPOXNPHOSPHN-RXN]]
| |
| − | ** 5 associated gene(s):
| |
| − | *** [[Tiso_gene_20000]]
| |
| − | *** [[Tiso_gene_6766]]
| |
| − | *** [[Tiso_gene_10646]]
| |
| − | *** [[Tiso_gene_3344]]
| |
| − | *** [[Tiso_gene_235]]
| |
| − | ** 7 reconstruction source(s) associated:
| |
| − | *** [[annotation-experimental_annotation]]
| |
| − | *** [[orthology-esiliculosus]]
| |
| − | *** [[annotation-in-silico_annotation]]
| |
| − | *** [[orthology-athaliana]]
| |
| − | *** [[orthology-synechocystis]]
| |
| − | *** [[manual-primary_network]]
| |
| − | *** [[orthology-creinhardtii]]
| |
| − | * [[PEPDEPHOS-RXN]]
| |
| − | ** 4 associated gene(s):
| |
| − | *** [[Tiso_gene_14504]]
| |
| − | *** [[Tiso_gene_18206]]
| |
| − | *** [[Tiso_gene_974]]
| |
| − | *** [[Tiso_gene_14505]]
| |
| − | ** 7 reconstruction source(s) associated:
| |
| − | *** [[annotation-experimental_annotation]]
| |
| − | *** [[orthology-esiliculosus]]
| |
| − | *** [[annotation-in-silico_annotation]]
| |
| − | *** [[orthology-athaliana]]
| |
| − | *** [[orthology-synechocystis]]
| |
| − | *** [[manual-primary_network]]
| |
| − | *** [[orthology-creinhardtii]]
| |
| − | * [[PHOSGLYPHOS-RXN]]
| |
| − | ** 6 associated gene(s):
| |
| − | *** [[Tiso_gene_3527]]
| |
| − | *** [[Tiso_gene_18263]]
| |
| − | *** [[Tiso_gene_12104]]
| |
| − | *** [[Tiso_gene_3526]]
| |
| − | *** [[Tiso_gene_14642]]
| |
| − | *** [[Tiso_gene_18264]]
| |
| − | ** 7 reconstruction source(s) associated:
| |
| − | *** [[annotation-experimental_annotation]]
| |
| − | *** [[orthology-esiliculosus]]
| |
| − | *** [[annotation-in-silico_annotation]]
| |
| − | *** [[orthology-athaliana]]
| |
| − | *** [[orthology-synechocystis]]
| |
| − | *** [[manual-primary_network]]
| |
| − | *** [[orthology-creinhardtii]]
| |
| − | * [[TRIOSEPISOMERIZATION-RXN]]
| |
| − | ** 4 associated gene(s):
| |
| − | *** [[Tiso_gene_20000]]
| |
| − | *** [[Tiso_gene_19961]]
| |
| − | *** [[Tiso_gene_10646]]
| |
| − | *** [[Tiso_gene_19962]]
| |
| − | ** 7 reconstruction source(s) associated:
| |
| − | *** [[annotation-experimental_annotation]]
| |
| − | *** [[orthology-esiliculosus]]
| |
| − | *** [[annotation-in-silico_annotation]]
| |
| − | *** [[orthology-athaliana]]
| |
| − | *** [[orthology-synechocystis]]
| |
| − | *** [[manual-primary_network]]
| |
| − | *** [[orthology-creinhardtii]]
| |
| | == Reaction(s) not found == | | == Reaction(s) not found == |
| − | * [http://metacyc.org/META/NEW-IMAGE?object=1.2.1.9-RXN 1.2.1.9-RXN] | + | * [http://metacyc.org/META/NEW-IMAGE?object=XYLISOM-RXN XYLISOM-RXN] |
| | == External links == | | == External links == |
| − | * ARACYC: | + | * ECOCYC: |
| − | ** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-1042 PWY-1042] | + | ** [http://metacyc.org/ECOLI/NEW-IMAGE?object=XYLCAT-PWY XYLCAT-PWY] |
| − | {{#set: taxonomic range=TAX-33090}} | + | {{#set: taxonomic range=TAX-4751}} |
| − | {{#set: common name=glycolysis IV (plant cytosol)}} | + | {{#set: taxonomic range=TAX-2}} |
| − | {{#set: common name=glycolysis 4}} | + | {{#set: common name=xylose degradation I}} |
| − | {{#set: reaction found=9}} | + | {{#set: common name=xylose catabolism}} |
| − | {{#set: total reaction=10}} | + | {{#set: reaction found=1}} |
| − | {{#set: completion rate=90.0}} | + | {{#set: total reaction=2}} |
| | + | {{#set: completion rate=50.0}} |
