Difference between revisions of "Tiso gene 17085"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16659 RXN-16659] == * direction: ** LEFT-TO-RIGHT * common name: ** peptidoglycan transpeptidas...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7394 PWY-7394] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16659 RXN-16659] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7394 PWY-7394] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
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** peptidoglycan transpeptidase (Gram-negative bacteria)
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** urate degradation to allantoin II
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** beta-lactamase
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* ec number:
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** [http://enzyme.expasy.org/EC/3.4.16.4 EC-3.4.16.4]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''2''' reactions found over '''3''' reactions in the full pathway
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** 1 [[CPD-17927]][c] '''+''' 1 [[CPD-17931]][c] '''=>''' 1 [[CPD-17932]][c] '''+''' 1 [[D-ALANINE]][c]
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* [[3.5.2.17-RXN]]
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* With common name(s):
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** 1 associated gene(s):
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** 1 a nascent peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine) pentapeptide[c] '''+''' 1 a peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine) tetrapeptide[c] '''=>''' 1 a nascent peptidoglycan with D,D cross-links (meso-diaminopimelate containing)[c] '''+''' 1 D-alanine[c]
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*** [[Tiso_gene_13181]]
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** 2 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-in-silico_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-creinhardtii]]
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* [[Tiso_gene_18870]]
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* [[RXN-6201]]
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** IN-SILICO_ANNOTATION
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** 0 associated gene:
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***EC-NUMBER
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** 1 reconstruction source(s) associated:
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== Pathways  ==
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*** [[annotation-in-silico_annotation]]
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* [[PWY0-1586]], peptidoglycan maturation (meso-diaminopimelate containing): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1586 PWY0-1586]
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== Reaction(s) not found ==
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** '''2''' reactions found over '''12''' reactions in the full pathway
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11186 RXN-11186]
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: common name=peptidoglycan transpeptidase (Gram-negative bacteria)}}
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{{#set: common name=urate degradation to allantoin II}}
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{{#set: common name=beta-lactamase}}
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{{#set: reaction found=2}}
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{{#set: ec number=EC-3.4.16.4}}
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{{#set: total reaction=3}}
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{{#set: gene associated=Tiso_gene_18870}}
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{{#set: completion rate=67.0}}
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{{#set: in pathway=PWY0-1586}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 15:05, 21 March 2018

Pathway PWY-7394

  • taxonomic range:
  • common name:
    • urate degradation to allantoin II
  • Synonym(s):

Reaction(s) found

2 reactions found over 3 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_17085&oldid=32313"