Difference between revisions of "VALSYN-PWY"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7782 PWY-7782] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-3...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7432 PWY-7432] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-3...")
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[[Category:Pathway]]
 
[[Category:Pathway]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7782 PWY-7782] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7432 PWY-7432] ==
 
* taxonomic range:
 
* taxonomic range:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-33208]
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
 
* common name:
 
* common name:
** plasmalogen biosynthesis
+
** L-phenylalanine biosynthesis III (cytosolic, plants)
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction(s) found ==
 
== Reaction(s) found ==
  '''7''' reactions found over '''16''' reactions in the full pathway
+
  '''3''' reactions found over '''4''' reactions in the full pathway
* [[2.7.7.14-RXN]]
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* [[4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN]]
** 1 associated gene(s):
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** 3 associated gene(s):
*** [[Tiso_gene_18070]]
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*** [[Tiso_gene_18977]]
 +
*** [[Tiso_gene_18976]]
 +
*** [[Tiso_gene_18328]]
 
** 4 reconstruction source(s) associated:
 
** 4 reconstruction source(s) associated:
 +
*** [[orthology-athaliana]]
 
*** [[annotation-in-silico_annotation]]
 
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-synechocystis]]
 +
*** [[orthology-esiliculosus]]
 +
* [[PHEAMINOTRANS-RXN]]
 +
** 7 associated gene(s):
 +
*** [[Tiso_gene_13892]]
 +
*** [[Tiso_gene_10680]]
 +
*** [[Tiso_gene_15680]]
 +
*** [[Tiso_gene_17809]]
 +
*** [[Tiso_gene_17718]]
 +
*** [[Tiso_gene_13538]]
 +
*** [[Tiso_gene_6815]]
 +
** 4 reconstruction source(s) associated:
 
*** [[orthology-athaliana]]
 
*** [[orthology-athaliana]]
 
*** [[orthology-creinhardtii]]
 
*** [[orthology-creinhardtii]]
 +
*** [[orthology-synechocystis]]
 
*** [[orthology-esiliculosus]]
 
*** [[orthology-esiliculosus]]
* [[CHOLINE-KINASE-RXN]]
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* [[PREPHENATEDEHYDRAT-RXN]]
** 1 associated gene(s):
+
*** [[Tiso_gene_16805]]
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** 1 reconstruction source(s) associated:
+
*** [[annotation-in-silico_annotation]]
+
* [[ETHANOLAMINE-KINASE-RXN]]
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** 0 associated gene:
+
** 1 reconstruction source(s) associated:
+
*** [[annotation-in-silico_annotation]]
+
* [[RXN-17729]]
+
** 1 associated gene(s):
+
*** [[Tiso_gene_13959]]
+
** 2 reconstruction source(s) associated:
+
*** [[annotation-in-silico_annotation]]
+
*** [[annotation-experimental_annotation]]
+
* [[RXN-17730]]
+
 
** 2 associated gene(s):
 
** 2 associated gene(s):
*** [[Tiso_gene_5063]]
+
*** [[Tiso_gene_6815]]
*** [[Tiso_gene_7386]]
+
*** [[Tiso_gene_5940]]
** 1 reconstruction source(s) associated:
+
** 3 reconstruction source(s) associated:
*** [[annotation-in-silico_annotation]]
+
*** [[manual-primary_network]]
* [[RXN-17731]]
+
** 1 associated gene(s):
+
*** [[Tiso_gene_13392]]
+
** 1 reconstruction source(s) associated:
+
*** [[annotation-in-silico_annotation]]
+
* [[RXN-5641]]
+
** 0 associated gene:
+
** 1 reconstruction source(s) associated:
+
 
*** [[annotation-in-silico_annotation]]
 
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
 
== Reaction(s) not found ==
 
== Reaction(s) not found ==
* [http://metacyc.org/META/NEW-IMAGE?object=2.3.1.42-RXN 2.3.1.42-RXN]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15200 RXN-15200]
* [http://metacyc.org/META/NEW-IMAGE?object=2.7.7.15-RXN 2.7.7.15-RXN]
+
* [http://metacyc.org/META/NEW-IMAGE?object=2.7.8.22-RXN 2.7.8.22-RXN]
+
* [http://metacyc.org/META/NEW-IMAGE?object=ALKYLGLYCERONE-PHOSPHATE-SYNTHASE-RXN ALKYLGLYCERONE-PHOSPHATE-SYNTHASE-RXN]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17728 RXN-17728]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17732 RXN-17732]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17733 RXN-17733]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-17734 RXN-17734]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9344 RXN-9344]
+
 
== External links  ==
 
== External links  ==
{{#set: taxonomic range=TAX-33208}}
+
{{#set: taxonomic range=TAX-33090}}
{{#set: common name=plasmalogen biosynthesis}}
+
{{#set: common name=L-phenylalanine biosynthesis III (cytosolic, plants)}}
{{#set: reaction found=7}}
+
{{#set: reaction found=3}}
{{#set: total reaction=16}}
+
{{#set: total reaction=4}}
{{#set: completion rate=44.0}}
+
{{#set: completion rate=75.0}}

Revision as of 15:11, 21 March 2018

Pathway PWY-7432

  • taxonomic range:
  • common name:
    • L-phenylalanine biosynthesis III (cytosolic, plants)
  • Synonym(s):

Reaction(s) found

3 reactions found over 4 reactions in the full pathway

Reaction(s) not found

External links