Difference between revisions of "RXN-8042"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-840 RXN1G-840] == * direction: ** LEFT-TO-RIGHT * common name: ** cis-delta17-3-oxo-C36:1-[ac...")
(Created page with "Category:Gene == Gene Tiso_gene_17216 == * right end position: ** 3672 * transcription direction: ** POSITIVE * left end position: ** 2433 * centisome position: ** 63.2934...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-840 RXN1G-840] ==
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== Gene Tiso_gene_17216 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 3672
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* common name:
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* transcription direction:
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** cis-delta17-3-oxo-C36:1-[acyl-carrier protein] synthase
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** POSITIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/2.3.1.M1 EC-2.3.1.M1]
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** 2433
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* centisome position:
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** 63.293446   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[6.3.4.10-RXN]]
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** 1 [[PROTON]][c] '''+''' 1 [[MALONYL-ACP]][c] '''+''' 1 [[cis-delta15-gheddoyl-ACPs]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[ACP]][c] '''+''' 1 [[cis-delta17-3-oxo-C36-ACPs]][c]
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** Source: [[orthology-esiliculosus]]
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* With common name(s):
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* Reaction: [[6.3.4.11-RXN]]
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** 1 H+[c] '''+''' 1 a malonyl-[acp][c] '''+''' 1 a cis-delta15-C34:1-[acp][c] '''=>''' 1 CO2[c] '''+''' 1 a holo-[acyl-carrier protein][c] '''+''' 1 a cis-delta17-3-oxo-C36:1-[acp][c]
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[6.3.4.9-RXN]]
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== Genes associated with this reaction  ==
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** Source: [[orthology-esiliculosus]]
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[BIOTINLIG-RXN]]
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* [[Tiso_gene_14485]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_15991]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_19302]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[PWYG-321]], mycolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWYG-321 PWYG-321]
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** '''86''' reactions found over '''182''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Reaction: [[RXN-13039]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17127]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-8654]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-8655]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN0-1141]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN0-5098]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: automated-name-match
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== Pathways associated ==
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* [[PWY-6984]]
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* [[PWY0-1264]]
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* [[PWY0-522]]
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* [[PWY0-1275]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=3672}}
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{{#set: common name=cis-delta17-3-oxo-C36:1-[acyl-carrier protein] synthase}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: ec number=EC-2.3.1.M1}}
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{{#set: left end position=2433}}
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{{#set: gene associated=Tiso_gene_14485|Tiso_gene_15991|Tiso_gene_19302}}
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{{#set: centisome position=63.293446    }}
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{{#set: in pathway=PWYG-321}}
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{{#set: reaction associated=6.3.4.10-RXN|6.3.4.11-RXN|6.3.4.9-RXN|BIOTINLIG-RXN|RXN-13039|RXN-17127|RXN-8654|RXN-8655|RXN0-1141|RXN0-5098}}
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{{#set: reconstruction category=orthology}}
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{{#set: pathway associated=PWY-6984|PWY0-1264|PWY0-522|PWY0-1275}}
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{{#set: reconstruction source=orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}
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Revision as of 16:13, 21 March 2018

Gene Tiso_gene_17216

  • right end position:
    • 3672
  • transcription direction:
    • POSITIVE
  • left end position:
    • 2433
  • centisome position:
    • 63.293446
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-8042&oldid=32938"