Difference between revisions of "RXN-10707"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12184 RXN-12184] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_synthase ** ORF...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=BILIRUBIN BILIRUBIN] == * smiles: ** C=CC1(=C(C(NC1=CC2(=C(C(=C(N2)CC3(NC(=C(C=3CCC(=O)[O-])C)C...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12184 RXN-12184] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=BILIRUBIN BILIRUBIN] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** C=CC1(=C(C(NC1=CC2(=C(C(=C(N2)CC3(NC(=C(C=3CCC(=O)[O-])C)C=C4(NC(C(=C4C)C=C)=O)))CCC(=O)[O-])C))=O)C)
 
* common name:
 
* common name:
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** polyketide_synthase
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** bilirubin
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** ORF
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* inchi key:
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** long_chain_acyl-_synthetase
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** InChIKey=BPYKTIZUTYGOLE-IFADSCNNSA-L
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** acyl-_synthetase
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* molecular weight:
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* ec number:
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** 582.655   
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** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[CO-A]][c] '''+''' 1 [[CPD-17637]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[CPD-17638]][c] '''+''' 1 [[AMP]][c]
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* [[BILIVERDIN-REDUCTASE-RXN]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 coenzyme A[c] '''+''' 1 7-hydroxylaurate[c] '''+''' 1 ATP[c] '''=>''' 1 diphosphate[c] '''+''' 1 7-hydroxylauroyl-CoA[c] '''+''' 1 AMP[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_9394]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_136]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_10876]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_348]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_500]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_135]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_7855]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_4191]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_13394]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-6733]], sporopollenin precursors biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6733 PWY-6733]
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** '''8''' reactions found over '''18''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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* PUBCHEM:
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{{#set: common name=polyketide_synthase}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=7067843 7067843]
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{{#set: common name=ORF}}
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* HMDB : HMDB00054
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{{#set: common name=long_chain_acyl-_synthetase}}
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* LIGAND-CPD:
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{{#set: common name=acyl-_synthetase}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00486 C00486]
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{{#set: ec number=EC-6.2.1.3}}
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* CHEMSPIDER:
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{{#set: gene associated=Tiso_gene_9394|Tiso_gene_136|Tiso_gene_10876|Tiso_gene_348|Tiso_gene_500|Tiso_gene_135|Tiso_gene_7855|Tiso_gene_4191|Tiso_gene_13394}}
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** [http://www.chemspider.com/Chemical-Structure.5422898.html 5422898]
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{{#set: in pathway=PWY-6733}}
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* CHEBI:
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{{#set: reconstruction category=annotation}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57977 57977]
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
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* METABOLIGHTS : MTBLC57977
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: smiles=C=CC1(=C(C(NC1=CC2(=C(C(=C(N2)CC3(NC(=C(C=3CCC(=O)[O-])C)C=C4(NC(C(=C4C)C=C)=O)))CCC(=O)[O-])C))=O)C)}}
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{{#set: common name=bilirubin}}
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{{#set: inchi key=InChIKey=BPYKTIZUTYGOLE-IFADSCNNSA-L}}
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{{#set: molecular weight=582.655    }}
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{{#set: produced by=BILIVERDIN-REDUCTASE-RXN}}

Revision as of 16:31, 21 March 2018

Metabolite BILIRUBIN

  • smiles:
    • C=CC1(=C(C(NC1=CC2(=C(C(=C(N2)CC3(NC(=C(C=3CCC(=O)[O-])C)C=C4(NC(C(=C4C)C=C)=O)))CCC(=O)[O-])C))=O)C)
  • common name:
    • bilirubin
  • inchi key:
    • InChIKey=BPYKTIZUTYGOLE-IFADSCNNSA-L
  • molecular weight:
    • 582.655
  • Synonym(s):

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"C=CC1(=C(C(NC1=CC2(=C(C(=C(N2)CC3(NC(=C(C=3CCC(=O)[O-])C)C=C4(NC(C(=C4C)C=C)=O)))CCC(=O)[O-])C))=O)C)" cannot be used as a page name in this wiki.



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