Difference between revisions of "GALACTUROISOM-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GART-RXN GART-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/EC/2.1.2...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11737 RXN-11737] == * direction: ** REVERSIBLE * common name: ** aminotransferase ** aspartate_...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GART-RXN GART-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11737 RXN-11737] ==
 
* direction:
 
* direction:
 
** REVERSIBLE
 
** REVERSIBLE
 +
* common name:
 +
** aminotransferase
 +
** aspartate_aminotransferase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.1.2.2 EC-2.1.2.2]
+
** [http://enzyme.expasy.org/EC/2.6.1.1 EC-2.6.1.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[5-PHOSPHO-RIBOSYL-GLYCINEAMIDE]][c] '''+''' 1 [[FORMYL-THF-GLU-N]][c] '''<=>''' 1 [[THF-GLU-N]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[5-P-RIBOSYL-N-FORMYLGLYCINEAMIDE]][c]
+
** 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[L-CYSTEATE]][c] '''<=>''' 1 [[CPD-380]][c] '''+''' 1 [[GLT]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 N1-(5-phospho-&beta;-D-ribosyl)glycinamide[c] '''+''' 1 an N10-formyl-tetrahydrofolate[c] '''<=>''' 1 a tetrahydrofolate[c] '''+''' 1 H+[c] '''+''' 1 N2-formyl-N1-(5-phospho-&beta;-D-ribosyl)glycinamide[c]
+
** 1 2-oxoglutarate[c] '''+''' 1 L-cysteate[c] '''<=>''' 1 3-sulfopyruvate[c] '''+''' 1 L-glutamate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Tiso_gene_13538]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_15680]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_6815]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-creinhardtii]]
 +
* Gene: [[Tiso_gene_12889]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Tiso_gene_17809]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Tiso_gene_17718]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6121]], 5-aminoimidazole ribonucleotide biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6121 PWY-6121]
+
* [[PWY-6638]], sulfolactate degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6638 PWY-6638]
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''1''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-6613]], tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6613 PWY-6613]
+
* [[PWY-6643]], coenzyme M biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6643 PWY-6643]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''1''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-6642]], (R)-cysteate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6642 PWY-6642]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[manual]]
+
* Category: [[orthology]]
−
** Source: [[manual-primary_network]]
+
** Source: [[orthology-athaliana]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-creinhardtii]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-experimental_annotation]]
 
** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15053 15053]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R04325 R04325]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02433 R02433]
−
* UNIPROT:
+
−
** [http://www.uniprot.org/uniprot/P21872 P21872]
+
−
** [http://www.uniprot.org/uniprot/P00967 P00967]
+
−
** [http://www.uniprot.org/uniprot/P16340 P16340]
+
−
** [http://www.uniprot.org/uniprot/P22102 P22102]
+
−
** [http://www.uniprot.org/uniprot/Q9PIU2 Q9PIU2]
+
−
** [http://www.uniprot.org/uniprot/Q9JTJ1 Q9JTJ1]
+
−
** [http://www.uniprot.org/uniprot/P43846 P43846]
+
−
** [http://www.uniprot.org/uniprot/Q64737 Q64737]
+
−
** [http://www.uniprot.org/uniprot/Q42805 Q42805]
+
−
** [http://www.uniprot.org/uniprot/Q9UUK7 Q9UUK7]
+
−
** [http://www.uniprot.org/uniprot/P12040 P12040]
+
−
** [http://www.uniprot.org/uniprot/P08179 P08179]
+
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
−
{{#set: ec number=EC-2.1.2.2}}
+
{{#set: common name=aminotransferase}}
−
{{#set: in pathway=PWY-6121|PWY-6613}}
+
{{#set: common name=aspartate_aminotransferase}}
−
{{#set: reconstruction category=manual|annotation}}
+
{{#set: ec number=EC-2.6.1.1}}
−
{{#set: reconstruction source=annotation-experimental_annotation|manual-primary_network|annotation-in-silico_annotation}}
+
{{#set: gene associated=Tiso_gene_13538|Tiso_gene_15680|Tiso_gene_6815|Tiso_gene_12889|Tiso_gene_17809|Tiso_gene_17718}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: in pathway=PWY-6638|PWY-6643|PWY-6642}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=orthology-creinhardtii|annotation-experimental_annotation|orthology-athaliana|annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 15:32, 21 March 2018

Reaction RXN-11737

  • direction:
    • REVERSIBLE
  • common name:
    • aminotransferase
    • aspartate_aminotransferase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 2-oxoglutarate[c] + 1 L-cysteate[c] <=> 1 3-sulfopyruvate[c] + 1 L-glutamate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6638, sulfolactate degradation III: PWY-6638
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-6643, coenzyme M biosynthesis II: PWY-6643
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-6642, (R)-cysteate degradation: PWY-6642
    • 1 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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