Difference between revisions of "RXN-13430"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17798 RXN-17798] == * direction: ** LEFT-TO-RIGHT * common name: ** hydroxyacyl-coenzyme_a_dehy...")
(Created page with "Category:Gene == Gene Tiso_gene_14867 == * right end position: ** 13558 * transcription direction: ** POSITIVE * left end position: ** 11442 * centisome position: ** 83.54...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17798 RXN-17798] ==
+
== Gene Tiso_gene_14867 ==
−
* direction:
+
* right end position:
−
** LEFT-TO-RIGHT
+
** 13558
−
* common name:
+
* transcription direction:
−
** hydroxyacyl-coenzyme_a_dehydrogenase_3-ketoacyl-coenzyme_a_thiolase_enoyl-coenzyme_a_hydratasealpha_subunit
+
** POSITIVE
−
** 3-hydroxyacyl-_dehydrogenase
+
* left end position:
−
** hydroxyacyl-coenzyme_a_mitochondrial
+
** 11442
−
* ec number:
+
* centisome position:
−
** [http://enzyme.expasy.org/EC/1.1.1.35 EC-1.1.1.35]
+
** 83.548744   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[URACIL-PRIBOSYLTRANS-RXN]]
−
** 1 [[CPD-19151]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[CPD-19153]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
+
−
* With common name(s):
+
−
** 1 (S)-3-hydroxy-(5Z)-dodecenoyl-CoA[c] '''+''' 1 NAD+[c] '''=>''' 1 3-oxo-(5Z)-dodecenoyl-CoA[c] '''+''' 1 NADH[c] '''+''' 1 H+[c]
+
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Tiso_gene_18838]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_14026]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_18839]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_5857]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_14262]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
== Pathways  ==
+
−
== Reconstruction information  ==
+
−
* Category: [[annotation]]
+
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Tool: [[pathwaytools]]
+
*** Assignment: automated-name-match
−
** Source: [[annotation-experimental_annotation]]
+
** Source: [[orthology-esiliculosus]]
−
*** Tool: [[pathwaytools]]
+
== Pathways associated ==
 +
* [[PWY-7183]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: right end position=13558}}
−
{{#set: common name=hydroxyacyl-coenzyme_a_dehydrogenase_3-ketoacyl-coenzyme_a_thiolase_enoyl-coenzyme_a_hydratasealpha_subunit}}
+
{{#set: transcription direction=POSITIVE}}
−
{{#set: common name=3-hydroxyacyl-_dehydrogenase}}
+
{{#set: left end position=11442}}
−
{{#set: common name=hydroxyacyl-coenzyme_a_mitochondrial}}
+
{{#set: centisome position=83.548744    }}
−
{{#set: ec number=EC-1.1.1.35}}
+
{{#set: reaction associated=URACIL-PRIBOSYLTRANS-RXN}}
−
{{#set: gene associated=Tiso_gene_18838|Tiso_gene_14026|Tiso_gene_18839|Tiso_gene_5857|Tiso_gene_14262}}
+
{{#set: pathway associated=PWY-7183}}
−
{{#set: in pathway=}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+

Revision as of 15:34, 21 March 2018

Gene Tiso_gene_14867

  • right end position:
    • 13558
  • transcription direction:
    • POSITIVE
  • left end position:
    • 11442
  • centisome position:
    • 83.548744
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-13430&oldid=34961"