Difference between revisions of "ATDAM"
From metabolic_network
(Created page with "Category:Gene == Gene Tiso_gene_16523 == * left end position: ** 196 * transcription direction: ** POSITIVE * right end position: ** 2224 * centisome position: ** 4.556020...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.2.21-RXN 3.2.2.21-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** dna-3-methyladenine_g...") |
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| Line 1: | Line 1: | ||
| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.2.21-RXN 3.2.2.21-RXN] == |
| − | * | + | * direction: |
| − | ** | + | ** LEFT-TO-RIGHT |
| − | * | + | * common name: |
| − | ** | + | ** dna-3-methyladenine_glycosylase_i |
| − | + | ** 3-methyladenine_dna_glycosylase | |
| − | ** | + | * ec number: |
| − | * | + | ** [http://enzyme.expasy.org/EC/3.2.2.21 EC-3.2.2.21] |
| − | ** | + | |
* Synonym(s): | * Synonym(s): | ||
| − | == | + | == Reaction Formula == |
| − | * [[ | + | * With identifiers: |
| − | * | + | ** 1 [[Alkylated-DNAs]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Alkylated-Bases]][c] '''+''' 1 [[DNA-containing-abasic-Sites]][c] |
| − | ** | + | * With common name(s): |
| − | * [[ | + | ** 1 an alkylated DNA[c] '''+''' 1 H2O[c] '''=>''' 1 an alkylated nucleobase[c] '''+''' 1 a DNA containing an apurinic/apyrimidinic site[c] |
| − | ** in-silico_annotation | + | |
| − | *** | + | == Genes associated with this reaction == |
| − | * [[ | + | Genes have been associated with this reaction based on different elements listed below. |
| − | ** in-silico_annotation | + | * Gene: [[Tiso_gene_15814]] |
| − | *** | + | ** Source: [[annotation-in-silico_annotation]] |
| − | == Pathways | + | *** Assignment: EC-NUMBER |
| − | * [[ | + | * Gene: [[Tiso_gene_7738]] |
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | == Pathways == | ||
| + | == Reconstruction information == | ||
| + | * Category: [[annotation]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| − | {{#set: | + | * UNIPROT: |
| − | {{#set: | + | ** [http://www.uniprot.org/uniprot/P04395 P04395] |
| − | {{#set: | + | {{#set: direction=LEFT-TO-RIGHT}} |
| − | {{#set: | + | {{#set: common name=dna-3-methyladenine_glycosylase_i}} |
| − | {{#set: | + | {{#set: common name=3-methyladenine_dna_glycosylase}} |
| − | {{#set: pathway | + | {{#set: ec number=EC-3.2.2.21}} |
| + | {{#set: gene associated=Tiso_gene_15814|Tiso_gene_7738}} | ||
| + | {{#set: in pathway=}} | ||
| + | {{#set: reconstruction category=annotation}} | ||
| + | {{#set: reconstruction source=annotation-in-silico_annotation}} | ||
| + | {{#set: reconstruction tool=pathwaytools}} | ||
Revision as of 15:41, 21 March 2018
Contents
Reaction 3.2.2.21-RXN
- direction:
- LEFT-TO-RIGHT
- common name:
- dna-3-methyladenine_glycosylase_i
- 3-methyladenine_dna_glycosylase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 Alkylated-DNAs[c] + 1 WATER[c] => 1 Alkylated-Bases[c] + 1 DNA-containing-abasic-Sites[c]
- With common name(s):
- 1 an alkylated DNA[c] + 1 H2O[c] => 1 an alkylated nucleobase[c] + 1 a DNA containing an apurinic/apyrimidinic site[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_15814
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_7738
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
Pathways
Reconstruction information
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
External links
- UNIPROT:
