Difference between revisions of "Tiso gene 20163"

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(Created page with "Category:Gene == Gene Tiso_gene_10165 == * left end position: ** 7216 * transcription direction: ** POSITIVE * right end position: ** 8281 * centisome position: ** 82.4026...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TYROSINE--TRNA-LIGASE-RXN TYROSINE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_10165 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TYROSINE--TRNA-LIGASE-RXN TYROSINE--TRNA-LIGASE-RXN] ==
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* left end position:
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* direction:
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** 7216
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** mitochondrial_tyrosyl-trna_synthetase
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* right end position:
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** methionyl-trna
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** 8281
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** ORF
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* centisome position:
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* ec number:
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** 82.40265   
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** [http://enzyme.expasy.org/EC/6.1.1.1 EC-6.1.1.1]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[NADPH-DEHYDROGENASE-FLAVIN-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[TYR]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[TYR-tRNAs]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[Charged-TYR-tRNAs]][c]
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***ec-number
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* With common name(s):
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* [[RXN-12445]]
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** 1 L-tyrosine[c] '''+''' 1 ATP[c] '''+''' 1 a tRNAtyr[c] '''=>''' 1 AMP[c] '''+''' 1 diphosphate[c] '''+''' 1 an L-tyrosyl-[tRNAtyr][c]
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** in-silico_annotation
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***ec-number
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== Genes associated with this reaction  ==
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== Pathways associated ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_10378]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_4174]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_12171]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_4175]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways ==
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* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
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** '''21''' reactions found over '''21''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=7216}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10220 10220]
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{{#set: right end position=8281}}
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* LIGAND-RXN:
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{{#set: centisome position=82.40265    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R02918 R02918]
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{{#set: reaction associated=NADPH-DEHYDROGENASE-FLAVIN-RXN|RXN-12445}}
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/P28669 P28669]
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** [http://www.uniprot.org/uniprot/P22326 P22326]
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** [http://www.uniprot.org/uniprot/P36421 P36421]
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** [http://www.uniprot.org/uniprot/P41256 P41256]
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** [http://www.uniprot.org/uniprot/O51343 O51343]
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** [http://www.uniprot.org/uniprot/Q9PN27 Q9PN27]
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** [http://www.uniprot.org/uniprot/Q9CIH5 Q9CIH5]
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** [http://www.uniprot.org/uniprot/Q9ZL69 Q9ZL69]
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** [http://www.uniprot.org/uniprot/P47693 P47693]
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** [http://www.uniprot.org/uniprot/Q9ZCZ4 Q9ZCZ4]
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** [http://www.uniprot.org/uniprot/P43836 P43836]
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** [http://www.uniprot.org/uniprot/O83806 O83806]
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** [http://www.uniprot.org/uniprot/Q57834 Q57834]
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** [http://www.uniprot.org/uniprot/P56417 P56417]
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** [http://www.uniprot.org/uniprot/O67632 O67632]
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** [http://www.uniprot.org/uniprot/O58739 O58739]
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** [http://www.uniprot.org/uniprot/Q9WYU8 Q9WYU8]
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** [http://www.uniprot.org/uniprot/O27795 O27795]
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** [http://www.uniprot.org/uniprot/O84065 O84065]
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** [http://www.uniprot.org/uniprot/Q9JVY6 Q9JVY6]
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** [http://www.uniprot.org/uniprot/P48527 P48527]
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** [http://www.uniprot.org/uniprot/Q49900 Q49900]
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** [http://www.uniprot.org/uniprot/P75122 P75122]
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** [http://www.uniprot.org/uniprot/P73141 P73141]
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** [http://www.uniprot.org/uniprot/P73144 P73144]
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** [http://www.uniprot.org/uniprot/P95982 P95982]
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** [http://www.uniprot.org/uniprot/P00952 P00952]
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** [http://www.uniprot.org/uniprot/P04077 P04077]
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** [http://www.uniprot.org/uniprot/P0AGJ9 P0AGJ9]
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** [http://www.uniprot.org/uniprot/P12063 P12063]
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** [http://www.uniprot.org/uniprot/P93363 P93363]
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** [http://www.uniprot.org/uniprot/O14055 O14055]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=mitochondrial_tyrosyl-trna_synthetase}}
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{{#set: common name=methionyl-trna}}
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{{#set: common name=ORF}}
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{{#set: ec number=EC-6.1.1.1}}
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{{#set: gene associated=Tiso_gene_10378|Tiso_gene_4174|Tiso_gene_12171|Tiso_gene_4175}}
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{{#set: in pathway=TRNA-CHARGING-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 15:52, 21 March 2018

Reaction TYROSINE--TRNA-LIGASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • mitochondrial_tyrosyl-trna_synthetase
    • methionyl-trna
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-tyrosine[c] + 1 ATP[c] + 1 a tRNAtyr[c] => 1 AMP[c] + 1 diphosphate[c] + 1 an L-tyrosyl-[tRNAtyr][c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links






Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_20163&oldid=36879"