Difference between revisions of "Tiso gene 10922"
From metabolic_network
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Acetic-Esters Acetic-Esters] == * common name: ** an acetic ester * Synonym(s): ** an acetyl es...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTSEMIALDEHYDROG-RXN GLUTSEMIALDEHYDROG-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** g...") |
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− | [[Category: | + | [[Category:Reaction]] |
− | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTSEMIALDEHYDROG-RXN GLUTSEMIALDEHYDROG-RXN] == |
+ | * direction: | ||
+ | ** LEFT-TO-RIGHT | ||
* common name: | * common name: | ||
− | ** | + | ** glutamate-5-semialdehyde_dehydrogenase |
+ | * ec number: | ||
+ | ** [http://enzyme.expasy.org/EC/1.2.1.41 EC-1.2.1.41] | ||
* Synonym(s): | * Synonym(s): | ||
− | |||
− | == Reaction(s) | + | == Reaction Formula == |
− | == | + | * With identifiers: |
− | == | + | ** 1 [[L-GLUTAMATE-5-P]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[L-GLUTAMATE_GAMMA-SEMIALDEHYDE]][c] |
− | * [[ | + | * With common name(s): |
+ | ** 1 γ-L-glutamyl 5-phosphate[c] '''+''' 1 H+[c] '''+''' 1 NADPH[c] '''=>''' 1 NADP+[c] '''+''' 1 phosphate[c] '''+''' 1 L-glutamate-5-semialdehyde[c] | ||
+ | |||
+ | == Genes associated with this reaction == | ||
+ | Genes have been associated with this reaction based on different elements listed below. | ||
+ | * Gene: [[Tiso_gene_16634]] | ||
+ | ** Source: [[orthology-athaliana]] | ||
+ | ** Source: [[orthology-synechocystis]] | ||
+ | ** Source: [[orthology-esiliculosus]] | ||
+ | ** Source: [[orthology-creinhardtii]] | ||
+ | * Gene: [[Tiso_gene_16258]] | ||
+ | ** Source: [[annotation-in-silico_annotation]] | ||
+ | *** Assignment: AUTOMATED-NAME-MATCH | ||
+ | == Pathways == | ||
+ | * [[PWY-6922]], L-Nδ-acetylornithine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6922 PWY-6922] | ||
+ | ** '''6''' reactions found over '''7''' reactions in the full pathway | ||
+ | * [[PROSYN-PWY]], L-proline biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PROSYN-PWY PROSYN-PWY] | ||
+ | ** '''4''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY-3341]], L-proline biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3341 PWY-3341] | ||
+ | ** '''5''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[ARGININE-SYN4-PWY]], L-ornithine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=ARGININE-SYN4-PWY ARGININE-SYN4-PWY] | ||
+ | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[CITRULBIO-PWY]], L-citrulline biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=CITRULBIO-PWY CITRULBIO-PWY] | ||
+ | ** '''8''' reactions found over '''8''' reactions in the full pathway | ||
+ | == Reconstruction information == | ||
+ | * Category: [[orthology]] | ||
+ | ** Source: [[orthology-athaliana]] | ||
+ | *** Tool: [[pantograph]] | ||
+ | ** Source: [[orthology-creinhardtii]] | ||
+ | *** Tool: [[pantograph]] | ||
+ | ** Source: [[orthology-synechocystis]] | ||
+ | *** Tool: [[pantograph]] | ||
+ | ** Source: [[orthology-esiliculosus]] | ||
+ | *** Tool: [[pantograph]] | ||
+ | * Category: [[manual]] | ||
+ | ** Source: [[manual-primary_network]] | ||
+ | * Category: [[annotation]] | ||
+ | ** Source: [[annotation-in-silico_annotation]] | ||
+ | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
− | {{#set: | + | * RHEA: |
− | {{#set: common name= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19541 19541] |
− | {{#set: | + | * LIGAND-RXN: |
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R03313 R03313] | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/Q9JUK8 Q9JUK8] | ||
+ | ** [http://www.uniprot.org/uniprot/P45121 P45121] | ||
+ | ** [http://www.uniprot.org/uniprot/P53000 P53000] | ||
+ | ** [http://www.uniprot.org/uniprot/P07004 P07004] | ||
+ | ** [http://www.uniprot.org/uniprot/P17857 P17857] | ||
+ | ** [http://www.uniprot.org/uniprot/P45638 P45638] | ||
+ | ** [http://www.uniprot.org/uniprot/P54885 P54885] | ||
+ | ** [http://www.uniprot.org/uniprot/O04226 O04226] | ||
+ | {{#set: direction=LEFT-TO-RIGHT}} | ||
+ | {{#set: common name=glutamate-5-semialdehyde_dehydrogenase}} | ||
+ | {{#set: ec number=EC-1.2.1.41}} | ||
+ | {{#set: gene associated=Tiso_gene_16634|Tiso_gene_16258}} | ||
+ | {{#set: in pathway=PWY-6922|PROSYN-PWY|PWY-3341|ARGININE-SYN4-PWY|CITRULBIO-PWY}} | ||
+ | {{#set: reconstruction category=orthology|manual|annotation}} | ||
+ | {{#set: reconstruction source=orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|orthology-synechocystis|manual-primary_network|orthology-creinhardtii}} | ||
+ | {{#set: reconstruction tool=pantograph|pathwaytools}} |
Revision as of 15:52, 21 March 2018
Contents
Reaction GLUTSEMIALDEHYDROG-RXN
- direction:
- LEFT-TO-RIGHT
- common name:
- glutamate-5-semialdehyde_dehydrogenase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 L-GLUTAMATE-5-P[c] + 1 PROTON[c] + 1 NADPH[c] => 1 NADP[c] + 1 Pi[c] + 1 L-GLUTAMATE_GAMMA-SEMIALDEHYDE[c]
- With common name(s):
- 1 γ-L-glutamyl 5-phosphate[c] + 1 H+[c] + 1 NADPH[c] => 1 NADP+[c] + 1 phosphate[c] + 1 L-glutamate-5-semialdehyde[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_16634
- Source: orthology-athaliana
- Source: orthology-synechocystis
- Source: orthology-esiliculosus
- Source: orthology-creinhardtii
- Gene: Tiso_gene_16258
- Source: annotation-in-silico_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-in-silico_annotation
Pathways
- PWY-6922, L-Nδ-acetylornithine biosynthesis: PWY-6922
- 6 reactions found over 7 reactions in the full pathway
- PROSYN-PWY, L-proline biosynthesis I: PROSYN-PWY
- 4 reactions found over 4 reactions in the full pathway
- PWY-3341, L-proline biosynthesis III: PWY-3341
- 5 reactions found over 5 reactions in the full pathway
- ARGININE-SYN4-PWY, L-ornithine biosynthesis II: ARGININE-SYN4-PWY
- 3 reactions found over 4 reactions in the full pathway
- CITRULBIO-PWY, L-citrulline biosynthesis: CITRULBIO-PWY
- 8 reactions found over 8 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-athaliana
- Tool: pantograph
- Source: orthology-creinhardtii
- Tool: pantograph
- Source: orthology-synechocystis
- Tool: pantograph
- Source: orthology-esiliculosus
- Tool: pantograph
- Source: orthology-athaliana
- Category: manual
- Source: manual-primary_network
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
External links