Difference between revisions of "2.7.12.1-RXN"

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(Created page with "Category:Gene == Gene Tiso_gene_3314 == * left end position: ** 11991 * transcription direction: ** POSITIVE * right end position: ** 14388 * centisome position: ** 70.411...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=R524-RXN R524-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** cyanate_hydratase * ec number...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_3314 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=R524-RXN R524-RXN] ==
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* left end position:
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* direction:
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** 11991
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** cyanate_hydratase
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* right end position:
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* ec number:
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** 14388
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** [http://enzyme.expasy.org/EC/4.2.1.104 EC-4.2.1.104]
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* centisome position:
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** 70.41104   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[DIHYDRONEOPTERIN-MONO-P-DEPHOS-RXN]]
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* With identifiers:
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** [[pantograph]]-[[esiliculosus]]
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** 1 [[PROTON]][c] '''+''' 1 [[CPD-69]][c] '''+''' 1 [[HCO3]][c] '''=>''' 1 [[CARBAMATE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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* [[H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN]]
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* With common name(s):
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** [[pantograph]]-[[esiliculosus]]
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** 1 H+[c] '''+''' 1 cyanate[c] '''+''' 1 hydrogencarbonate[c] '''=>''' 1 carbamate[c] '''+''' 1 CO2[c]
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* [[RXN-15684]]
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** in-silico_annotation
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== Genes associated with this reaction  ==
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***ec-number
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Genes have been associated with this reaction based on different elements listed below.
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** [[pantograph]]-[[esiliculosus]]
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* Gene: [[Tiso_gene_15128]]
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* [[THIOL-OXIDASE-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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** in-silico_annotation
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*** Assignment: AUTOMATED-NAME-MATCH
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***ec-number
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** Source: [[annotation-experimental_annotation]]
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** [[pantograph]]-[[esiliculosus]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways associated ==
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** Source: [[orthology-athaliana]]
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* [[PWY-7539]]
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== Pathways  ==
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* [[PWY-7533]]
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* [[CYANCAT-PWY]], cyanate degradation: [http://metacyc.org/META/NEW-IMAGE?object=CYANCAT-PWY CYANCAT-PWY]
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* [[PWY-6797]]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-6147]]
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=11991}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18489 18489]
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{{#set: right end position=14388}}
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* LIGAND-RXN:
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{{#set: centisome position=70.41104    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R03546 R03546]
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{{#set: reaction associated=DIHYDRONEOPTERIN-MONO-P-DEPHOS-RXN|H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN|RXN-15684|THIOL-OXIDASE-RXN}}
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* UNIPROT:
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{{#set: pathway associated=PWY-7539|PWY-7533|PWY-6797|PWY-6147}}
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** [http://www.uniprot.org/uniprot/P00816 P00816]
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** [http://www.uniprot.org/uniprot/Q55367 Q55367]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=cyanate_hydratase}}
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{{#set: ec number=EC-4.2.1.104}}
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{{#set: gene associated=Tiso_gene_15128}}
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{{#set: in pathway=CYANCAT-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-athaliana|annotation-experimental_annotation}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 15:53, 21 March 2018

Reaction R524-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • cyanate_hydratase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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