Difference between revisions of "RXN-10953"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GTPPYPHOSKIN-RXN GTPPYPHOSKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ca2+-activate...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HISTONE-LYSINE-N-METHYLTRANSFERASE-RXN HISTONE-LYSINE-N-METHYLTRANSFERASE-RXN] == * direction: ** L...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GTPPYPHOSKIN-RXN GTPPYPHOSKIN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HISTONE-LYSINE-N-METHYLTRANSFERASE-RXN HISTONE-LYSINE-N-METHYLTRANSFERASE-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** ca2+-activated_spot-like_protein
+
** ORF
−
** gtp_pyrophosphokinase
+
** probable_histone-lysine_n-methyltransferase_nsd2-like
 +
** histone-lysine_n-methyltransferase_setmar
 +
** histone-lysine_n-_h3_lysine-79_specific
 +
** histone-lysine_n-h3lysine-79specific
 +
** methyltransferase_type_11
 +
** mixed-lineage_leukemia_protein
 +
** histone-lysine_n-methyltransferase_mll3
 +
** histone-lysine_n-_h3_lysine-9_specific_suvh6
 +
** pentatricopeptide_repeat_domain-containing_protein
 +
** histone-lysine_n-methyltransferase_suv39h1
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.7.6.5 EC-2.7.6.5]
+
** [http://enzyme.expasy.org/EC/2.1.1.43 EC-2.1.1.43]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ATP]][c] '''+''' 1 [[GTP]][c] '''=>''' 1 [[GDP-TP]][c] '''+''' 1 [[AMP]][c]
+
** 1 [[Histone-L-lysine]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[CPD-8579]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 ATP[c] '''+''' 1 GTP[c] '''=>''' 1 pppGpp[c] '''+''' 1 AMP[c]
+
** 1 a [histone]-L-lysine[c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 a [histone] N6-methyl-L-lysine[c] '''+''' 1 H+[c] '''+''' 1 S-adenosyl-L-homocysteine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_6799]]
+
* Gene: [[Tiso_gene_19883]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_16305]]
+
** Source: [[orthology-esiliculosus]]
−
** [[pantograph]]-[[esiliculosus]]
+
* Gene: [[Tiso_gene_15903]]
−
** [[pantograph]]-[[creinhardtii]]
+
** Source: [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_7349]]
+
*** Assignment: EC-NUMBER
−
** IN-SILICO_ANNOTATION
+
** Source: [[orthology-esiliculosus]]
−
***AUTOMATED-NAME-MATCH
+
* Gene: [[Tiso_gene_10757]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_15293]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_5703]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_344]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_8895]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_18698]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_14051]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_11071]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_8634]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_13974]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_4657]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_13588]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_10659]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_2144]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_11001]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_13973]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_10896]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_3977]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PPGPPMET-PWY]], ppGpp biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PPGPPMET-PWY PPGPPMET-PWY]
 
−
** '''5''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
−
** Source: [[orthology-creinhardtii]]
 
−
*** Tool: [[pantograph]]
 
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
Line 40: Line 105:
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22088 22088]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00429 R00429]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03938 R03938]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/Q9CJ94 Q9CJ94]
+
** [http://www.uniprot.org/uniprot/Q43088 Q43088]
−
** [http://www.uniprot.org/uniprot/P44644 P44644]
+
−
** [http://www.uniprot.org/uniprot/Q9PDR3 Q9PDR3]
+
−
** [http://www.uniprot.org/uniprot/P0AG20 P0AG20]
+
−
** [http://www.uniprot.org/uniprot/P52560 P52560]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=ca2+-activated_spot-like_protein}}
+
{{#set: common name=ORF}}
−
{{#set: common name=gtp_pyrophosphokinase}}
+
{{#set: common name=probable_histone-lysine_n-methyltransferase_nsd2-like}}
−
{{#set: ec number=EC-2.7.6.5}}
+
{{#set: common name=histone-lysine_n-methyltransferase_setmar}}
−
{{#set: gene associated=Tiso_gene_6799|Tiso_gene_16305|Tiso_gene_7349}}
+
{{#set: common name=histone-lysine_n-_h3_lysine-79_specific}}
−
{{#set: in pathway=PPGPPMET-PWY}}
+
{{#set: common name=histone-lysine_n-h3lysine-79specific}}
 +
{{#set: common name=methyltransferase_type_11}}
 +
{{#set: common name=mixed-lineage_leukemia_protein}}
 +
{{#set: common name=histone-lysine_n-methyltransferase_mll3}}
 +
{{#set: common name=histone-lysine_n-_h3_lysine-9_specific_suvh6}}
 +
{{#set: common name=pentatricopeptide_repeat_domain-containing_protein}}
 +
{{#set: common name=histone-lysine_n-methyltransferase_suv39h1}}
 +
{{#set: ec number=EC-2.1.1.43}}
 +
{{#set: gene associated=Tiso_gene_19883|Tiso_gene_15903|Tiso_gene_10757|Tiso_gene_15293|Tiso_gene_5703|Tiso_gene_344|Tiso_gene_8895|Tiso_gene_18698|Tiso_gene_14051|Tiso_gene_11071|Tiso_gene_8634|Tiso_gene_13974|Tiso_gene_4657|Tiso_gene_13588|Tiso_gene_10659|Tiso_gene_2144|Tiso_gene_11001|Tiso_gene_13973|Tiso_gene_10896|Tiso_gene_3977}}
 +
{{#set: in pathway=}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction source=orthology-creinhardtii|annotation-in-silico_annotation|orthology-esiliculosus}}
+
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 16:02, 21 March 2018

Reaction HISTONE-LYSINE-N-METHYLTRANSFERASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ORF
    • probable_histone-lysine_n-methyltransferase_nsd2-like
    • histone-lysine_n-methyltransferase_setmar
    • histone-lysine_n-_h3_lysine-79_specific
    • histone-lysine_n-h3lysine-79specific
    • methyltransferase_type_11
    • mixed-lineage_leukemia_protein
    • histone-lysine_n-methyltransferase_mll3
    • histone-lysine_n-_h3_lysine-9_specific_suvh6
    • pentatricopeptide_repeat_domain-containing_protein
    • histone-lysine_n-methyltransferase_suv39h1
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links










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