Difference between revisions of "DXPREDISOM-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=MALONYL-COA-ACP-TRANSACYL-RXN MALONYL-COA-ACP-TRANSACYL-RXN] == * direction: ** LEFT-TO-RIGHT * com...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-15685 CPD-15685] == * smiles: ** CCCCCCC=CC=CCC=CC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(O...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=MALONYL-COA-ACP-TRANSACYL-RXN MALONYL-COA-ACP-TRANSACYL-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-15685 CPD-15685] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** CCCCCCC=CC=CCC=CC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]
 
* common name:
 
* common name:
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** polyketide_synthase
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** 2-trans, 5-cis, 7-trans-tetradecatrienoyl-CoA
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** malonyl-_:acp_transacylase
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* inchi key:
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* ec number:
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** InChIKey=XPVHXTGUZGACRU-MCFMHTHASA-J
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** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
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* molecular weight:
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** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
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** 967.814   
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** [http://enzyme.expasy.org/EC/2.3.1.39 EC-2.3.1.39]
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* Synonym(s):
 
* Synonym(s):
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** 2E, 5Z, 7E-tetradecatrienoyl-CoA
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[MALONYL-COA]][c] '''+''' 1 [[ACP]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[MALONYL-ACP]][c]
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* [[RXN-14796]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 malonyl-CoA[c] '''+''' 1 a holo-[acyl-carrier protein][c] '''=>''' 1 coenzyme A[c] '''+''' 1 a malonyl-[acp][c]
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−
 
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_500]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_10876]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_136]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_19309]]
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** [[pantograph]]-[[synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_135]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_18460]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[synechocystis]]
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* [[Tiso_gene_13394]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-6799]], fatty acid biosynthesis (plant mitochondria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6799 PWY-6799]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-4381]], fatty acid biosynthesis initiation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4381 PWY-4381]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-7388]], octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7388 PWY-7388]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-synechocystis]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[manual]]
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** Source: [[manual-primary_network]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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* PUBCHEM:
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** [http://www.genome.jp/dbget-bin/www_bget?R01626 R01626]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=90657959 90657959]
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* UNIPROT:
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{{#set: smiles=CCCCCCC=CC=CCC=CC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]}}
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** [http://www.uniprot.org/uniprot/P72391 P72391]
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{{#set: common name=2-trans, 5-cis, 7-trans-tetradecatrienoyl-CoA}}
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** [http://www.uniprot.org/uniprot/P49327 P49327]
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{{#set: inchi key=InChIKey=XPVHXTGUZGACRU-MCFMHTHASA-J}}
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** [http://www.uniprot.org/uniprot/O34825 O34825]
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{{#set: molecular weight=967.814    }}
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** [http://www.uniprot.org/uniprot/Q9RT24 Q9RT24]
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{{#set: common name=2E, 5Z, 7E-tetradecatrienoyl-CoA}}
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** [http://www.uniprot.org/uniprot/Q9JW58 Q9JW58]
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{{#set: produced by=RXN-14796}}
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** [http://www.uniprot.org/uniprot/P0AAI9 P0AAI9]
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** [http://www.uniprot.org/uniprot/O24916 O24916]
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** [http://www.uniprot.org/uniprot/Q9JXR4 Q9JXR4]
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** [http://www.uniprot.org/uniprot/Q9ZCJ6 Q9ZCJ6]
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** [http://www.uniprot.org/uniprot/Q9YBK5 Q9YBK5]
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** [http://www.uniprot.org/uniprot/Q9PJ11 Q9PJ11]
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** [http://www.uniprot.org/uniprot/P43712 P43712]
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** [http://www.uniprot.org/uniprot/Q9Z8P1 Q9Z8P1]
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** [http://www.uniprot.org/uniprot/O67041 O67041]
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** [http://www.uniprot.org/uniprot/Q9ZMY1 Q9ZMY1]
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** [http://www.uniprot.org/uniprot/Q9PKF6 Q9PKF6]
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** [http://www.uniprot.org/uniprot/P63458 P63458]
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** [http://www.uniprot.org/uniprot/O84241 O84241]
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** [http://www.uniprot.org/uniprot/Q9WZQ5 Q9WZQ5]
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** [http://www.uniprot.org/uniprot/P71019 P71019]
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** [http://www.uniprot.org/uniprot/P07149 P07149]
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** [http://www.uniprot.org/uniprot/P73242 P73242]
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** [http://www.uniprot.org/uniprot/Q8RU07 Q8RU07]
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** [http://www.uniprot.org/uniprot/Q54205 Q54205]
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** [http://www.uniprot.org/uniprot/O54437 O54437]
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** [http://www.uniprot.org/uniprot/Q56692 Q56692]
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** [http://www.uniprot.org/uniprot/O13698 O13698]
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** [http://www.uniprot.org/uniprot/Q9RA34 Q9RA34]
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** [http://www.uniprot.org/uniprot/O69476 O69476]
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** [http://www.uniprot.org/uniprot/P12276 P12276]
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** [http://www.uniprot.org/uniprot/P12785 P12785]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=polyketide_synthase}}
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{{#set: common name=malonyl-_:acp_transacylase}}
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{{#set: ec number=EC-2.3.1.86}}
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{{#set: ec number=EC-2.3.1.85}}
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{{#set: ec number=EC-2.3.1.39}}
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{{#set: gene associated=Tiso_gene_500|Tiso_gene_10876|Tiso_gene_136|Tiso_gene_19309|Tiso_gene_135|Tiso_gene_18460|Tiso_gene_13394}}
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{{#set: in pathway=PWY-6799|PWY-4381|PWY-7388}}
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{{#set: reconstruction category=orthology|manual|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|manual-primary_network|annotation-in-silico_annotation|orthology-synechocystis|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Revision as of 16:04, 21 March 2018

Metabolite CPD-15685

  • smiles:
    • CCCCCCC=CC=CCC=CC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]
  • common name:
    • 2-trans, 5-cis, 7-trans-tetradecatrienoyl-CoA
  • inchi key:
    • InChIKey=XPVHXTGUZGACRU-MCFMHTHASA-J
  • molecular weight:
    • 967.814
  • Synonym(s):
    • 2E, 5Z, 7E-tetradecatrienoyl-CoA

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"CCCCCCC=CC=CCC=CC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-" cannot be used as a page name in this wiki.



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