Difference between revisions of "FUM"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11989 RXN-11989] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=FUM FUM] == * smiles: ** C(C([O-])=O)=CC(=O)[O-] * common name: ** fumarate * inchi key: ** InC...")
 
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[[Category:Reaction]]
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[[Category:Metabolite]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11989 RXN-11989] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=FUM FUM] ==
* direction:
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* smiles:
** LEFT-TO-RIGHT
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** C(C([O-])=O)=CC(=O)[O-]
* ec number:
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* common name:
** [http://enzyme.expasy.org/EC/1.13.11.59 EC-1.13.11.59]
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** fumarate
 +
* inchi key:
 +
** InChIKey=VZCYOOQTPOCHFL-OWOJBTEDSA-L
 +
* molecular weight:
 +
** 114.057   
 
* Synonym(s):
 
* Synonym(s):
 +
** fum
 +
** fumaric acid
  
== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
* With identifiers:
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* [[RXN-9929]]
** 1 [[CPD-7953]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CPD-12935]][c] '''+''' 1 [[PRENAL]][c]
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== Reaction(s) known to produce the compound ==
* With common name(s):
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* [[SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN]]
** 1 torulene[c] '''+''' 1 oxygen[c] '''=>''' 1 4'-apo-β-carotenal[c] '''+''' 1 3-methyl-2-butenal[c]
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* [[FUMARYLACETOACETASE-RXN]]
 
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* [[FAA]]
== Genes associated with this reaction  ==
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* [[AAL_fum]]
Genes have been associated with this reaction based on different elements listed below.
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* [[RXN-22]]
* Gene: [[Tiso_gene_4653]]
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== Reaction(s) of unknown directionality ==
** Source: [[orthology-esiliculosus]]
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* [[FUMARATE-REDUCTASE-NADH-RXN]]
* Gene: [[Tiso_gene_7740]]
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* [[AMPSYN-RXN]]
** Source: [[orthology-esiliculosus]]
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* [[AICARSYN-RXN]]
== Pathways  ==
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* [[AIAL]]
* [[PWY-6681]], neurosporaxanthin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6681 PWY-6681]
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* [[ARGSUCCINLYA-RXN]]
** '''2''' reactions found over '''7''' reactions in the full pathway
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* [[FUMHYDR-RXN]]
== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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== External links  ==
 
== External links  ==
* RHEA:
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* CAS : 110-17-8
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31522 31522]
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* BIGG : fum
{{#set: direction=LEFT-TO-RIGHT}}
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* DRUGBANK : DB01677
{{#set: ec number=EC-1.13.11.59}}
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* PUBCHEM:
{{#set: gene associated=Tiso_gene_4653|Tiso_gene_7740}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=5460307 5460307]
{{#set: in pathway=PWY-6681}}
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* KNAPSACK : C00001183
{{#set: reconstruction category=orthology}}
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* HMDB : HMDB00134
{{#set: reconstruction source=orthology-esiliculosus}}
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* LIGAND-CPD:
{{#set: reconstruction tool=pantograph}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00122 C00122]
 +
* CHEMSPIDER:
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** [http://www.chemspider.com/Chemical-Structure.4573886.html 4573886]
 +
* CHEBI:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=29806 29806]
 +
* METABOLIGHTS : MTBLC29806
 +
{{#set: smiles=C(C([O-])=O)=CC(=O)[O-]}}
 +
{{#set: common name=fumarate}}
 +
{{#set: inchi key=InChIKey=VZCYOOQTPOCHFL-OWOJBTEDSA-L}}
 +
{{#set: molecular weight=114.057    }}
 +
{{#set: common name=fum|fumaric acid}}
 +
{{#set: consumed by=RXN-9929}}
 +
{{#set: produced by=SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN|FUMARYLACETOACETASE-RXN|FAA|AAL_fum|RXN-22}}
 +
{{#set: reversible reaction associated=FUMARATE-REDUCTASE-NADH-RXN|AMPSYN-RXN|AICARSYN-RXN|AIAL|ARGSUCCINLYA-RXN|FUMHYDR-RXN}}

Latest revision as of 19:42, 21 March 2018

Metabolite FUM

  • smiles:
    • C(C([O-])=O)=CC(=O)[O-]
  • common name:
    • fumarate
  • inchi key:
    • InChIKey=VZCYOOQTPOCHFL-OWOJBTEDSA-L
  • molecular weight:
    • 114.057
  • Synonym(s):
    • fum
    • fumaric acid

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 110-17-8
  • BIGG : fum
  • DRUGBANK : DB01677
  • PUBCHEM:
  • KNAPSACK : C00001183
  • HMDB : HMDB00134
  • LIGAND-CPD:
  • CHEMSPIDER:
  • CHEBI:
  • METABOLIGHTS : MTBLC29806
"C(C([O-])=O)=CC(=O)[O-" cannot be used as a page name in this wiki.