Difference between revisions of "GALACTUROISOM-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11737 RXN-11737] == * direction: ** REVERSIBLE * common name: ** aminotransferase ** aspartate_...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GALACTUROISOM-RXN GALACTUROISOM-RXN] == * direction: ** REVERSIBLE * common name: ** ORF ** bh0493_...")
 
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11737 RXN-11737] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GALACTUROISOM-RXN GALACTUROISOM-RXN] ==
 
* direction:
 
* direction:
 
** REVERSIBLE
 
** REVERSIBLE
 
* common name:
 
* common name:
−
** aminotransferase
+
** ORF
−
** aspartate_aminotransferase
+
** bh0493_protein
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.6.1.1 EC-2.6.1.1]
+
** [http://enzyme.expasy.org/EC/5.3.1.12 EC-5.3.1.12]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[L-CYSTEATE]][c] '''<=>''' 1 [[CPD-380]][c] '''+''' 1 [[GLT]][c]
+
** 1 [[CPD-15633]][c] '''<=>''' 1 [[D-TAGATURONATE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 2-oxoglutarate[c] '''+''' 1 L-cysteate[c] '''<=>''' 1 3-sulfopyruvate[c] '''+''' 1 L-glutamate[c]
+
** 1 aldehydo-D-galacturonate[c] '''<=>''' 1 D-tagaturonate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Tiso_gene_13538]]
+
* Gene: [[Tiso_gene_19097]]
−
** Source: [[orthology-esiliculosus]]
+
−
* Gene: [[Tiso_gene_15680]]
+
−
** Source: [[orthology-esiliculosus]]
+
−
* Gene: [[Tiso_gene_6815]]
+
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
** Source: [[annotation-experimental_annotation]]
+
* Gene: [[Tiso_gene_8329]]
−
*** Assignment: EC-NUMBER
+
−
** Source: [[orthology-creinhardtii]]
+
−
* Gene: [[Tiso_gene_12889]]
+
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Assignment: AUTOMATED-NAME-MATCH
 
−
* Gene: [[Tiso_gene_17809]]
 
−
** Source: [[annotation-in-silico_annotation]]
 
−
*** Assignment: AUTOMATED-NAME-MATCH
 
−
* Gene: [[Tiso_gene_17718]]
 
−
** Source: [[annotation-experimental_annotation]]
 
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
** Source: [[orthology-athaliana]]
 
−
** Source: [[orthology-esiliculosus]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6638]], sulfolactate degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6638 PWY-6638]
+
* [[PWY-7248]], pectin degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7248 PWY-7248]
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
** '''1''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-6643]], coenzyme M biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6643 PWY-6643]
+
* [[GALACTUROCAT-PWY]], D-galacturonate degradation I: [http://metacyc.org/META/NEW-IMAGE?object=GALACTUROCAT-PWY GALACTUROCAT-PWY]
−
** '''1''' reactions found over '''6''' reactions in the full pathway
+
** '''2''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-6642]], (R)-cysteate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6642 PWY-6642]
+
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
 
−
** Source: [[orthology-athaliana]]
 
−
*** Tool: [[pantograph]]
 
−
** Source: [[orthology-creinhardtii]]
 
−
*** Tool: [[pantograph]]
 
−
** Source: [[orthology-esiliculosus]]
 
−
*** Tool: [[pantograph]]
 
 
* Category: [[annotation]]
 
* Category: [[annotation]]
−
** Source: [[annotation-experimental_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27702 27702]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02433 R02433]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01983 R01983]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P0A8G3 P0A8G3]
 +
** [http://www.uniprot.org/uniprot/Q9CF53 Q9CF53]
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
−
{{#set: common name=aminotransferase}}
+
{{#set: common name=ORF}}
−
{{#set: common name=aspartate_aminotransferase}}
+
{{#set: common name=bh0493_protein}}
−
{{#set: ec number=EC-2.6.1.1}}
+
{{#set: ec number=EC-5.3.1.12}}
−
{{#set: gene associated=Tiso_gene_13538|Tiso_gene_15680|Tiso_gene_6815|Tiso_gene_12889|Tiso_gene_17809|Tiso_gene_17718}}
+
{{#set: gene associated=Tiso_gene_19097|Tiso_gene_8329}}
−
{{#set: in pathway=PWY-6638|PWY-6643|PWY-6642}}
+
{{#set: in pathway=PWY-7248|GALACTUROCAT-PWY}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction source=orthology-creinhardtii|annotation-experimental_annotation|orthology-athaliana|annotation-in-silico_annotation|orthology-esiliculosus}}
+
{{#set: reconstruction source=annotation-in-silico_annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:51, 21 March 2018

Reaction GALACTUROISOM-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • ORF
    • bh0493_protein
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 aldehydo-D-galacturonate[c] <=> 1 D-tagaturonate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=GALACTUROISOM-RXN&oldid=44243"