Difference between revisions of "DUMP"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9384 RXN-9384] == * direction: ** REVERSIBLE * Synonym(s): == Reaction Formula == * With ident...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DUMP DUMP] == * smiles: ** C(OP(=O)([O-])[O-])C1(OC(CC(O)1)N2(C=CC(=O)NC(=O)2)) * common name:...")
 
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9384 RXN-9384] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DUMP DUMP] ==
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* direction:
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* smiles:
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** REVERSIBLE
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** C(OP(=O)([O-])[O-])C1(OC(CC(O)1)N2(C=CC(=O)NC(=O)2))
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* common name:
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** dUMP
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* inchi key:
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** InChIKey=JSRLJPSBLDHEIO-SHYZEUOFSA-L
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* molecular weight:
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** 306.168   
 
* Synonym(s):
 
* Synonym(s):
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** deoxyurdine-phosphate
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** 2'-deoxyuridine 5-monophosphate
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** deoxyuridine-phosphate
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** 2'-deoxyuridine 5'-phosphate
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** 2'-deoxyuridylic acid
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** 2'-deoxy-5'-uridylic acid
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[RXN-14143]]
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** 1 [[O-SUCCINYL-L-HOMOSERINE]][c] '''+''' 1 [[HS]][c] '''<=>''' 1 [[HOMO-CYS]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[SUC]][c]
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* [[THYMIDYLATESYN-RXN]]
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* With common name(s):
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== Reaction(s) known to produce the compound ==
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** 1 O-succinyl-L-homoserine[c] '''+''' 1 hydrogen sulfide[c] '''<=>''' 1 L-homocysteine[c] '''+''' 1 H+[c] '''+''' 1 succinate[c]
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* [[RXN-14220]]
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* [[RXN-14199]]
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== Genes associated with this reaction  ==
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* [[DUTP-PYROP-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[DUTNH]]
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* Gene: [[Tiso_gene_2848]]
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* [[DCMP-DEAMINASE-RXN]]
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** Source: [[orthology-athaliana]]
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== Reaction(s) of unknown directionality ==
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_11582]]
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** Source: [[orthology-athaliana]]
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* Gene: [[Tiso_gene_18201]]
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** Source: [[orthology-athaliana]]
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* Gene: [[Tiso_gene_10317]]
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_3732]]
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** Source: [[orthology-creinhardtii]]
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* CAS : 964-26-1
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27826 27826]
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* BIGG : dump
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* LIGAND-RXN:
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* PUBCHEM:
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** [http://www.genome.jp/dbget-bin/www_bget?R01288 R01288]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=18601100 18601100]
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{{#set: direction=REVERSIBLE}}
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* HMDB : HMDB01409
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{{#set: gene associated=Tiso_gene_2848|Tiso_gene_11582|Tiso_gene_18201|Tiso_gene_10317|Tiso_gene_3732}}
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* LIGAND-CPD:
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{{#set: in pathway=}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00365 C00365]
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{{#set: reconstruction category=orthology}}
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* CHEMSPIDER:
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{{#set: reconstruction source=orthology-athaliana|orthology-creinhardtii|orthology-esiliculosus}}
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** [http://www.chemspider.com/Chemical-Structure.18555972.html 18555972]
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{{#set: reconstruction tool=pantograph}}
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* CHEBI:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=246422 246422]
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* METABOLIGHTS : MTBLC246422
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{{#set: smiles=C(OP(=O)([O-])[O-])C1(OC(CC(O)1)N2(C=CC(=O)NC(=O)2))}}
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{{#set: common name=dUMP}}
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{{#set: inchi key=InChIKey=JSRLJPSBLDHEIO-SHYZEUOFSA-L}}
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{{#set: molecular weight=306.168    }}
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{{#set: common name=deoxyurdine-phosphate|2'-deoxyuridine 5-monophosphate|deoxyuridine-phosphate|2'-deoxyuridine 5'-phosphate|2'-deoxyuridylic acid|2'-deoxy-5'-uridylic acid}}
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{{#set: consumed by=RXN-14143|THYMIDYLATESYN-RXN}}
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{{#set: produced by=RXN-14220|RXN-14199|DUTP-PYROP-RXN|DUTNH|DCMP-DEAMINASE-RXN}}

Latest revision as of 19:52, 21 March 2018

Metabolite DUMP

  • smiles:
    • C(OP(=O)([O-])[O-])C1(OC(CC(O)1)N2(C=CC(=O)NC(=O)2))
  • common name:
    • dUMP
  • inchi key:
    • InChIKey=JSRLJPSBLDHEIO-SHYZEUOFSA-L
  • molecular weight:
    • 306.168
  • Synonym(s):
    • deoxyurdine-phosphate
    • 2'-deoxyuridine 5-monophosphate
    • deoxyuridine-phosphate
    • 2'-deoxyuridine 5'-phosphate
    • 2'-deoxyuridylic acid
    • 2'-deoxy-5'-uridylic acid

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 964-26-1
  • BIGG : dump
  • PUBCHEM:
  • HMDB : HMDB01409
  • LIGAND-CPD:
  • CHEMSPIDER:
  • CHEBI:
  • METABOLIGHTS : MTBLC246422
"C(OP(=O)([O-])[O-])C1(OC(CC(O)1)N2(C=CC(=O)NC(=O)2))" cannot be used as a page name in this wiki.




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