Difference between revisions of "PHOSPHORIBULOSYL-FORMIMINO-AICAR-P"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIAMINOPIMDECARB-RXN DIAMINOPIMDECARB-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** diami...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHORIBULOSYL-FORMIMINO-AICAR-P PHOSPHORIBULOSYL-FORMIMINO-AICAR-P] == * smiles: ** C(OP(=O)...")
 
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIAMINOPIMDECARB-RXN DIAMINOPIMDECARB-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHORIBULOSYL-FORMIMINO-AICAR-P PHOSPHORIBULOSYL-FORMIMINO-AICAR-P] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** C(OP(=O)([O-])[O-])C(O)C(O)C(=O)CN=CNC2(N(C1(C(O)C(C(COP(=O)([O-])[O-])O1)O))C=NC(C(=O)N)=2)
 
* common name:
 
* common name:
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** diaminopimelate_decarboxylase
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** phosphoribulosylformimino-AICAR-phosphate
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* ec number:
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* inchi key:
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** [http://enzyme.expasy.org/EC/4.1.1.20 EC-4.1.1.20]
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** InChIKey=BLKFNHOCHNCLII-GHVQHMAVSA-J
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* molecular weight:
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** 573.303   
 
* Synonym(s):
 
* Synonym(s):
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** 5-[(5-phospho-1-deoxy-β-D-ribulos-1-ylamino)methylideneamino]-1-(5-phosphoribosyl)imidazole-4-carboxamide
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** N-(5'-phospho-D-1'-ribulosylformimino)-5-amino-1-(5''-phosphoribosyl)-4-imidazolecarboxamide
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** phosphoribulosylformiminoAICAR-phosphate
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** phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribotide phosphate
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** phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate
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** PRFAR
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** N-(5'phospho-D-1'-ribulosylformimino)-5-amino-1-(5-phosphoribosyl)-4-imidazolecarboxamide
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** phosphoribulosylformimino-AICAR-P
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[GLUTAMIDOTRANS-RXN]]
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** 1 [[PROTON]][c] '''+''' 1 [[MESO-DIAMINOPIMELATE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[LYS]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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* [[PRICI]]
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** 1 H+[c] '''+''' 1 meso-diaminopimelate[c] '''=>''' 1 CO2[c] '''+''' 1 L-lysine[c]
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* [[PRIBFAICARPISOM-RXN]]
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== Reaction(s) of unknown directionality ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_10737]]
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** Source: [[orthology-synechocystis]]
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* Gene: [[Tiso_gene_12041]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-synechocystis]]
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** Source: [[orthology-esiliculosus]]
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** Source: [[orthology-creinhardtii]]
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== Pathways  ==
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* [[PWY-5097]], L-lysine biosynthesis VI: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5097 PWY-5097]
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** '''7''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-2942]], L-lysine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2942 PWY-2942]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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* [[DAPLYSINESYN-PWY]], L-lysine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=DAPLYSINESYN-PWY DAPLYSINESYN-PWY]
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** '''6''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-2941]], L-lysine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2941 PWY-2941]
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** '''6''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-synechocystis]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[manual]]
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** Source: [[manual-primary_network]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* LIGAND-CPD:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15101 15101]
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** [http://www.genome.jp/dbget-bin/www_bget?C04916 C04916]
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* LIGAND-RXN:
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* HMDB : HMDB12278
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** [http://www.genome.jp/dbget-bin/www_bget?R00451 R00451]
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* CHEBI:
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* UNIPROT:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=58525 58525]
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** [http://www.uniprot.org/uniprot/P19572 P19572]
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* BIGG : prlp
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** [http://www.uniprot.org/uniprot/P0A5M4 P0A5M4]
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* PUBCHEM:
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** [http://www.uniprot.org/uniprot/P44316 P44316]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=45266672 45266672]
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** [http://www.uniprot.org/uniprot/P56129 P56129]
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{{#set: smiles=C(OP(=O)([O-])[O-])C(O)C(O)C(=O)CN=CNC2(N(C1(C(O)C(C(COP(=O)([O-])[O-])O1)O))C=NC(C(=O)N)=2)}}
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** [http://www.uniprot.org/uniprot/O67262 O67262]
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{{#set: common name=phosphoribulosylformimino-AICAR-phosphate}}
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** [http://www.uniprot.org/uniprot/Q9JWA6 Q9JWA6]
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{{#set: inchi key=InChIKey=BLKFNHOCHNCLII-GHVQHMAVSA-J}}
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** [http://www.uniprot.org/uniprot/Q9CG26 Q9CG26]
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{{#set: molecular weight=573.303    }}
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** [http://www.uniprot.org/uniprot/P00861 P00861]
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{{#set: common name=5-[(5-phospho-1-deoxy-β-D-ribulos-1-ylamino)methylideneamino]-1-(5-phosphoribosyl)imidazole-4-carboxamide|N-(5'-phospho-D-1'-ribulosylformimino)-5-amino-1-(5''-phosphoribosyl)-4-imidazolecarboxamide|phosphoribulosylformiminoAICAR-phosphate|phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribotide phosphate|phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate|PRFAR|N-(5'phospho-D-1'-ribulosylformimino)-5-amino-1-(5-phosphoribosyl)-4-imidazolecarboxamide|phosphoribulosylformimino-AICAR-P}}
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** [http://www.uniprot.org/uniprot/O27390 O27390]
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{{#set: consumed by=GLUTAMIDOTRANS-RXN}}
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** [http://www.uniprot.org/uniprot/Q9PII5 Q9PII5]
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{{#set: produced by=PRICI|PRIBFAICARPISOM-RXN}}
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** [http://www.uniprot.org/uniprot/Q58497 Q58497]
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** [http://www.uniprot.org/uniprot/O29458 O29458]
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** [http://www.uniprot.org/uniprot/P41023 P41023]
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** [http://www.uniprot.org/uniprot/P23630 P23630]
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** [http://www.uniprot.org/uniprot/P09890 P09890]
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** [http://www.uniprot.org/uniprot/Q55484 Q55484]
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** [http://www.uniprot.org/uniprot/O05321 O05321]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=diaminopimelate_decarboxylase}}
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{{#set: ec number=EC-4.1.1.20}}
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{{#set: gene associated=Tiso_gene_10737|Tiso_gene_12041}}
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{{#set: in pathway=PWY-5097|PWY-2942|DAPLYSINESYN-PWY|PWY-2941}}
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{{#set: reconstruction category=orthology|manual|annotation}}
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{{#set: reconstruction source=orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|orthology-synechocystis|manual-primary_network|orthology-creinhardtii}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 19:56, 21 March 2018

Metabolite PHOSPHORIBULOSYL-FORMIMINO-AICAR-P

  • smiles:
    • C(OP(=O)([O-])[O-])C(O)C(O)C(=O)CN=CNC2(N(C1(C(O)C(C(COP(=O)([O-])[O-])O1)O))C=NC(C(=O)N)=2)
  • common name:
    • phosphoribulosylformimino-AICAR-phosphate
  • inchi key:
    • InChIKey=BLKFNHOCHNCLII-GHVQHMAVSA-J
  • molecular weight:
    • 573.303
  • Synonym(s):
    • 5-[(5-phospho-1-deoxy-β-D-ribulos-1-ylamino)methylideneamino]-1-(5-phosphoribosyl)imidazole-4-carboxamide
    • N-(5'-phospho-D-1'-ribulosylformimino)-5-amino-1-(5-phosphoribosyl)-4-imidazolecarboxamide
    • phosphoribulosylformiminoAICAR-phosphate
    • phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribotide phosphate
    • phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate
    • PRFAR
    • N-(5'phospho-D-1'-ribulosylformimino)-5-amino-1-(5-phosphoribosyl)-4-imidazolecarboxamide
    • phosphoribulosylformimino-AICAR-P

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"C(OP(=O)([O-])[O-])C(O)C(O)C(=O)CN=CNC2(N(C1(C(O)C(C(COP(=O)([O-])[O-])O1)O))C=NC(C(=O)N)=2)" cannot be used as a page name in this wiki.


"5-[(5-phospho-1-deoxy-β-D-ribulos-1-ylamino)methylideneamino]-1-(5-phosphoribosyl)imidazole-4-carboxamide" cannot be used as a page name in this wiki.


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