Difference between revisions of "RXN-14065"
From metabolic_network
(Created page with "Category:Gene == Gene Tiso_gene_4164 == * right end position: ** 7436 * transcription direction: ** NEGATIVE * left end position: ** 6 * centisome position: ** 3.927215600...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14065 RXN-14065] == * direction: ** LEFT-TO-RIGHT * common name: ** nucleoside_hydrolase * ec n...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14065 RXN-14065] == |
| − | * | + | * direction: |
| − | + | ** LEFT-TO-RIGHT | |
| − | + | * common name: | |
| − | ** | + | ** nucleoside_hydrolase |
| − | * | + | * ec number: |
| − | ** | + | ** [http://enzyme.expasy.org/EC/3.2.2.10 EC-3.2.2.10] |
| − | * | + | |
| − | ** 3. | + | |
* Synonym(s): | * Synonym(s): | ||
| − | == | + | == Reaction Formula == |
| − | * | + | * With identifiers: |
| + | ** 1 [[CMP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CYTOSINE]][c] '''+''' 1 [[CPD-15317]][c] | ||
| + | * With common name(s): | ||
| + | ** 1 CMP[c] '''+''' 1 H2O[c] '''=>''' 1 cytosine[c] '''+''' 1 D-ribofuranose 5-phosphate[c] | ||
| + | |||
| + | == Genes associated with this reaction == | ||
| + | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * Gene: [[Tiso_gene_11910]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Assignment: AUTOMATED-NAME-MATCH | ||
| + | * Gene: [[Tiso_gene_12995]] | ||
** Source: [[annotation-in-silico_annotation]] | ** Source: [[annotation-in-silico_annotation]] | ||
| − | *** Assignment: | + | *** Assignment: AUTOMATED-NAME-MATCH |
| − | * | + | == Pathways == |
| + | * [[PWY-7570]], blasticidin S biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7570 PWY-7570] | ||
| + | ** '''1''' reactions found over '''10''' reactions in the full pathway | ||
| + | * [[PWY-7569]], arginomycin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7569 PWY-7569] | ||
| + | ** '''1''' reactions found over '''9''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * Category: [[annotation]] | ||
** Source: [[annotation-in-silico_annotation]] | ** Source: [[annotation-in-silico_annotation]] | ||
| − | *** | + | *** Tool: [[pathwaytools]] |
| − | + | ||
== External links == | == External links == | ||
| − | {{#set: | + | * RHEA: |
| − | {{#set: | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30078 30078] |
| − | {{#set: | + | * LIGAND-RXN: |
| − | {{#set: | + | ** [http://www.genome.jp/dbget-bin/www_bget?R00510 R00510] |
| − | {{#set: | + | {{#set: direction=LEFT-TO-RIGHT}} |
| + | {{#set: common name=nucleoside_hydrolase}} | ||
| + | {{#set: ec number=EC-3.2.2.10}} | ||
| + | {{#set: gene associated=Tiso_gene_11910|Tiso_gene_12995}} | ||
| + | {{#set: in pathway=PWY-7570|PWY-7569}} | ||
| + | {{#set: reconstruction category=annotation}} | ||
| + | {{#set: reconstruction source=annotation-in-silico_annotation}} | ||
| + | {{#set: reconstruction tool=pathwaytools}} | ||
Latest revision as of 20:01, 21 March 2018
Contents
Reaction RXN-14065
- direction:
- LEFT-TO-RIGHT
- common name:
- nucleoside_hydrolase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1 CMP[c] + 1 H2O[c] => 1 cytosine[c] + 1 D-ribofuranose 5-phosphate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_11910
- Source: annotation-in-silico_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_12995
- Source: annotation-in-silico_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-in-silico_annotation
Pathways
- PWY-7570, blasticidin S biosynthesis: PWY-7570
- 1 reactions found over 10 reactions in the full pathway
- PWY-7569, arginomycin biosynthesis: PWY-7569
- 1 reactions found over 9 reactions in the full pathway
Reconstruction information
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
External links
