Difference between revisions of "Tiso gene 1682"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5182 RXN0-5182] == * direction: ** LEFT-TO-RIGHT * common name: ** thymidine_phosphorylase * e...")
(Created page with "Category:Gene == Gene Tiso_gene_1682 == * right end position: ** 11339 * transcription direction: ** POSITIVE * left end position: ** 9336 * centisome position: ** 29.8838...")
 
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5182 RXN0-5182] ==
+
== Gene Tiso_gene_1682 ==
−
* direction:
+
* right end position:
−
** LEFT-TO-RIGHT
+
** 11339
−
* common name:
+
* transcription direction:
−
** thymidine_phosphorylase
+
** POSITIVE
−
* ec number:
+
* left end position:
−
** [http://enzyme.expasy.org/EC/2.4.1.1 EC-2.4.1.1]
+
** 9336
 +
* centisome position:
 +
** 29.883808   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[RXN0-2161]]
−
** 1 [[MALTOTETRAOSE]][c] '''+''' 1 [[Pi]][c] '''=>''' 1 [[MALTOTRIOSE]][c] '''+''' 1 [[GLC-1-P]][c]
+
−
* With common name(s):
+
−
** 1 maltotetraose[c] '''+''' 1 phosphate[c] '''=>''' 1 maltotriose[c] '''+''' 1 α-D-glucopyranose 1-phosphate[c]
+
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* Gene: [[Tiso_gene_1011]]
+
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Assignment: EC-NUMBER
+
*** Assignment: ec-number
−
== Pathways  ==
+
** Source: [[annotation-experimental_annotation]]
−
* [[GLYCOCAT-PWY]], glycogen degradation I: [http://metacyc.org/META/NEW-IMAGE?object=GLYCOCAT-PWY GLYCOCAT-PWY]
+
*** Assignment: ec-number
−
** '''6''' reactions found over '''8''' reactions in the full pathway
+
* Reaction: [[SERINE--TRNA-LIGASE-RXN]]
−
== Reconstruction information  ==
+
−
* Category: [[annotation]]
+
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Tool: [[pathwaytools]]
+
*** Assignment: ec-number
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: ec-number
 +
== Pathways associated ==
 +
* [[TRNA-CHARGING-PWY]]
 +
* [[PWY0-901]]
 +
* [[PWY-6281]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: right end position=11339}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29691 29691]
+
{{#set: transcription direction=POSITIVE}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: left end position=9336}}
−
{{#set: common name=thymidine_phosphorylase}}
+
{{#set: centisome position=29.883808    }}
−
{{#set: ec number=EC-2.4.1.1}}
+
{{#set: reaction associated=RXN0-2161|SERINE--TRNA-LIGASE-RXN}}
−
{{#set: gene associated=Tiso_gene_1011}}
+
{{#set: pathway associated=TRNA-CHARGING-PWY|PWY0-901|PWY-6281}}
−
{{#set: in pathway=GLYCOCAT-PWY}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction source=annotation-in-silico_annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+

Latest revision as of 20:16, 21 March 2018

Gene Tiso_gene_1682

  • right end position:
    • 11339
  • transcription direction:
    • POSITIVE
  • left end position:
    • 9336
  • centisome position:
    • 29.883808
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_1682&oldid=47369"