Difference between revisions of "RXN-14187"

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(Created page with "Category:Gene == Gene Tiso_gene_4615 == * right end position: ** 14665 * transcription direction: ** NEGATIVE * left end position: ** 12189 * centisome position: ** 83.087...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14187 RXN-14187] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF * ec number: ** [http:/...")
 
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_4615 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14187 RXN-14187] ==
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* right end position:
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* direction:
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** 14665
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** ORF
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* left end position:
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* ec number:
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** 12189
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** [http://enzyme.expasy.org/EC/3.6.1.6 EC-3.6.1.6]
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* centisome position:
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** 83.08794   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* Reaction: [[ALPHAGALACTOSID-RXN]]
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* With identifiers:
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** Source: [[annotation-in-silico_annotation]]
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** 1 [[WATER]][c] '''+''' 1 [[DCDP]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[DCMP]][c] '''+''' 1 [[PROTON]][c]
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*** Assignment: automated-name-match
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* With common name(s):
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** Source: [[orthology-creinhardtii]]
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** 1 H2O[c] '''+''' 1 dCDP[c] '''=>''' 1 phosphate[c] '''+''' 1 dCMP[c] '''+''' 1 H+[c]
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* Reaction: [[RXN-11501]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: automated-name-match
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Genes have been associated with this reaction based on different elements listed below.
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** Source: [[orthology-creinhardtii]]
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* Gene: [[Tiso_gene_20236]]
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* Reaction: [[RXN-11502]]
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** Source: [[orthology-esiliculosus]]
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** Source: [[annotation-in-silico_annotation]]
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* Gene: [[Tiso_gene_12899]]
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*** Assignment: automated-name-match
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** Source: [[orthology-creinhardtii]]
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* Reaction: [[RXN-12088]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17754]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: automated-name-match
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*** Assignment: EC-NUMBER
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* Reaction: [[RXN-17830]]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY-7210]], pyrimidine deoxyribonucleotides biosynthesis from CTP: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7210 PWY-7210]
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** '''8''' reactions found over '''8''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: automated-name-match
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*** Tool: [[pathwaytools]]
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== Pathways associated ==
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* [[PWY-6527]]
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* [[PWY0-1301]]
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== External links  ==
 
== External links  ==
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{{#set: right end position=14665}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: common name=ORF}}
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{{#set: left end position=12189}}
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{{#set: ec number=EC-3.6.1.6}}
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{{#set: centisome position=83.08794    }}
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{{#set: gene associated=Tiso_gene_20236|Tiso_gene_12899}}
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{{#set: reaction associated=ALPHAGALACTOSID-RXN|RXN-11501|RXN-11502|RXN-12088|RXN-17754|RXN-17830}}
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{{#set: in pathway=PWY-7210}}
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{{#set: pathway associated=PWY-6527|PWY0-1301}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:20, 21 March 2018

Reaction RXN-14187

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 dCDP[c] => 1 phosphate[c] + 1 dCMP[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7210, pyrimidine deoxyribonucleotides biosynthesis from CTP: PWY-7210
    • 8 reactions found over 8 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-14187&oldid=47973"