Difference between revisions of "Tiso gene 7953"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN] == * direction: ** LEF...")
(Created page with "Category:Gene == Gene Tiso_gene_7953 == * right end position: ** 10584 * transcription direction: ** POSITIVE * left end position: ** 7945 * centisome position: ** 74.4611...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN] ==
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== Gene Tiso_gene_7953 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 10584
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/4.1.1.39 EC-4.1.1.39]
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** POSITIVE
 +
* left end position:
 +
** 7945
 +
* centisome position:
 +
** 74.461105   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[RXN-6883]]
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** 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[D-RIBULOSE-15-P2]][c] '''=>''' 2 [[G3P]][c] '''+''' 2 [[PROTON]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 CO2[c] '''+''' 1 H2O[c] '''+''' 1 D-ribulose-1,5-bisphosphate[c] '''=>''' 2 3-phospho-D-glycerate[c] '''+''' 2 H+[c]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: automated-name-match
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== Genes associated with this reaction  ==
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−
Genes have been associated with this reaction based on different elements listed below.
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−
* Gene: [[Tiso_gene_12199]]
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−
** Source: [[orthology-esiliculosus]]
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−
== Pathways  ==
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−
* [[PWY-5532]], nucleoside and nucleotide degradation (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5532 PWY-5532]
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−
** '''3''' reactions found over '''10''' reactions in the full pathway
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−
* [[CALVIN-PWY]], Calvin-Benson-Bassham cycle: [http://metacyc.org/META/NEW-IMAGE?object=CALVIN-PWY CALVIN-PWY]
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** '''13''' reactions found over '''13''' reactions in the full pathway
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* [[PWY-5723]], Rubisco shunt: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5723 PWY-5723]
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−
** '''10''' reactions found over '''10''' reactions in the full pathway
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−
== Reconstruction information  ==
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−
* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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== Pathways associated ==
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* Category: [[manual]]
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* [[PWY-4302]]
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** Source: [[manual-primary_network]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=10584}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23124 23124]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=7945}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00024 R00024]
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{{#set: centisome position=74.461105    }}
−
* UNIPROT:
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{{#set: reaction associated=RXN-6883}}
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** [http://www.uniprot.org/uniprot/P00875 P00875]
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{{#set: pathway associated=PWY-4302}}
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** [http://www.uniprot.org/uniprot/P56648 P56648]
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−
** [http://www.uniprot.org/uniprot/Q7M229 Q7M229]
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** [http://www.uniprot.org/uniprot/Q7M1Q6 Q7M1Q6]
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−
** [http://www.uniprot.org/uniprot/P24672 P24672]
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** [http://www.uniprot.org/uniprot/P24673 P24673]
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−
** [http://www.uniprot.org/uniprot/Q9MVE5 Q9MVE5]
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** [http://www.uniprot.org/uniprot/P48713 P48713]
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** [http://www.uniprot.org/uniprot/Q09119 Q09119]
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−
** [http://www.uniprot.org/uniprot/P28896 P28896]
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** [http://www.uniprot.org/uniprot/Q09125 Q09125]
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** [http://www.uniprot.org/uniprot/O28685 O28685]
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** [http://www.uniprot.org/uniprot/O28635 O28635]
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−
** [http://www.uniprot.org/uniprot/Q9UZD7 Q9UZD7]
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−
** [http://www.uniprot.org/uniprot/P20455 P20455]
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** [http://www.uniprot.org/uniprot/O58677 O58677]
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** [http://www.uniprot.org/uniprot/O31666 O31666]
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−
** [http://www.uniprot.org/uniprot/Q59102 Q59102]
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−
** [http://www.uniprot.org/uniprot/P42721 P42721]
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−
** [http://www.uniprot.org/uniprot/Q59462 Q59462]
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−
** [http://www.uniprot.org/uniprot/Q02980 Q02980]
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−
** [http://www.uniprot.org/uniprot/P27065 P27065]
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−
** [http://www.uniprot.org/uniprot/P04991 P04991]
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** [http://www.uniprot.org/uniprot/P00879 P00879]
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** [http://www.uniprot.org/uniprot/P24395 P24395]
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** [http://www.uniprot.org/uniprot/P28895 P28895]
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** [http://www.uniprot.org/uniprot/P05698 P05698]
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** [http://www.uniprot.org/uniprot/P26958 P26958]
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** [http://www.uniprot.org/uniprot/P14958 P14958]
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−
** [http://www.uniprot.org/uniprot/P31333 P31333]
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−
** [http://www.uniprot.org/uniprot/P00872 P00872]
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** [http://www.uniprot.org/uniprot/P19309 P19309]
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−
** [http://www.uniprot.org/uniprot/P19308 P19308]
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** [http://www.uniprot.org/uniprot/P19311 P19311]
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** [http://www.uniprot.org/uniprot/P19310 P19310]
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** [http://www.uniprot.org/uniprot/P19312 P19312]
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** [http://www.uniprot.org/uniprot/P00878 P00878]
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** [http://www.uniprot.org/uniprot/P28258 P28258]
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** [http://www.uniprot.org/uniprot/P19161 P19161]
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** [http://www.uniprot.org/uniprot/P19162 P19162]
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−
** [http://www.uniprot.org/uniprot/P07089 P07089]
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−
** [http://www.uniprot.org/uniprot/P08705 P08705]
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−
** [http://www.uniprot.org/uniprot/P28260 P28260]
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−
** [http://www.uniprot.org/uniprot/P26490 P26490]
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−
** [http://www.uniprot.org/uniprot/P16032 P16032]
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−
** [http://www.uniprot.org/uniprot/P16134 P16134]
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−
** [http://www.uniprot.org/uniprot/P16131 P16131]
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** [http://www.uniprot.org/uniprot/P16136 P16136]
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** [http://www.uniprot.org/uniprot/P16132 P16132]
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** [http://www.uniprot.org/uniprot/P16137 P16137]
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** [http://www.uniprot.org/uniprot/P16133 P16133]
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** [http://www.uniprot.org/uniprot/P16138 P16138]
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** [http://www.uniprot.org/uniprot/P24674 P24674]
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** [http://www.uniprot.org/uniprot/P26961 P26961]
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** [http://www.uniprot.org/uniprot/P26964 P26964]
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−
** [http://www.uniprot.org/uniprot/P24682 P24682]
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−
** [http://www.uniprot.org/uniprot/P17673 P17673]
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−
** [http://www.uniprot.org/uniprot/P26959 P26959]
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−
** [http://www.uniprot.org/uniprot/P69571 P69571]
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−
** [http://www.uniprot.org/uniprot/P26960 P26960]
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** [http://www.uniprot.org/uniprot/P24681 P24681]
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−
** [http://www.uniprot.org/uniprot/P26963 P26963]
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−
** [http://www.uniprot.org/uniprot/P24671 P24671]
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−
** [http://www.uniprot.org/uniprot/P69570 P69570]
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−
** [http://www.uniprot.org/uniprot/P16031 P16031]
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−
** [http://www.uniprot.org/uniprot/P24624 P24624]
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−
** [http://www.uniprot.org/uniprot/P25458 P25458]
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−
** [http://www.uniprot.org/uniprot/P12466 P12466]
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−
** [http://www.uniprot.org/uniprot/P00877 P00877]
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** [http://www.uniprot.org/uniprot/P08211 P08211]
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** [http://www.uniprot.org/uniprot/P00873 P00873]
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** [http://www.uniprot.org/uniprot/P08475 P08475]
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** [http://www.uniprot.org/uniprot/P22849 P22849]
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** [http://www.uniprot.org/uniprot/P22859 P22859]
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** [http://www.uniprot.org/uniprot/P22850 P22850]
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** [http://www.uniprot.org/uniprot/P22860 P22860]
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** [http://www.uniprot.org/uniprot/P24312 P24312]
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** [http://www.uniprot.org/uniprot/P08474 P08474]
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** [http://www.uniprot.org/uniprot/P06292 P06292]
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** [http://www.uniprot.org/uniprot/P16306 P16306]
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** [http://www.uniprot.org/uniprot/P14961 P14961]
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** [http://www.uniprot.org/uniprot/P10795 P10795]
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** [http://www.uniprot.org/uniprot/P10796 P10796]
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** [http://www.uniprot.org/uniprot/P10797 P10797]
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−
** [http://www.uniprot.org/uniprot/P10798 P10798]
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** [http://www.uniprot.org/uniprot/P27568 P27568]
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** [http://www.uniprot.org/uniprot/P22433 P22433]
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** [http://www.uniprot.org/uniprot/P00876 P00876]
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** [http://www.uniprot.org/uniprot/P11421 P11421]
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** [http://www.uniprot.org/uniprot/P11422 P11422]
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** [http://www.uniprot.org/uniprot/P69249 P69249]
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** [http://www.uniprot.org/uniprot/P69250 P69250]
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−
** [http://www.uniprot.org/uniprot/P26573 P26573]
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−
** [http://www.uniprot.org/uniprot/P19163 P19163]
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−
** [http://www.uniprot.org/uniprot/P19164 P19164]
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−
** [http://www.uniprot.org/uniprot/P25414 P25414]
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−
** [http://www.uniprot.org/uniprot/P24313 P24313]
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−
** [http://www.uniprot.org/uniprot/P23651 P23651]
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−
** [http://www.uniprot.org/uniprot/P23652 P23652]
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−
** [http://www.uniprot.org/uniprot/P04992 P04992]
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−
** [http://www.uniprot.org/uniprot/P04717 P04717]
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−
** [http://www.uniprot.org/uniprot/P00868 P00868]
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−
** [http://www.uniprot.org/uniprot/P07689 P07689]
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−
** [http://www.uniprot.org/uniprot/P00869 P00869]
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−
** [http://www.uniprot.org/uniprot/P26576 P26576]
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−
** [http://www.uniprot.org/uniprot/P26577 P26577]
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−
** [http://www.uniprot.org/uniprot/P26574 P26574]
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−
** [http://www.uniprot.org/uniprot/P26575 P26575]
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** [http://www.uniprot.org/uniprot/P10647 P10647]
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−
** [http://www.uniprot.org/uniprot/P18960 P18960]
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−
** [http://www.uniprot.org/uniprot/P24683 P24683]
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−
** [http://www.uniprot.org/uniprot/P23011 P23011]
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** [http://www.uniprot.org/uniprot/P23012 P23012]
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−
** [http://www.uniprot.org/uniprot/P27997 P27997]
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−
** [http://www.uniprot.org/uniprot/P27998 P27998]
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−
** [http://www.uniprot.org/uniprot/P27985 P27985]
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−
** [http://www.uniprot.org/uniprot/P05346 P05346]
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−
** [http://www.uniprot.org/uniprot/P08135 P08135]
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−
** [http://www.uniprot.org/uniprot/P12089 P12089]
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−
** [http://www.uniprot.org/uniprot/P05347 P05347]
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−
** [http://www.uniprot.org/uniprot/P18566 P18566]
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−
** [http://www.uniprot.org/uniprot/P18567 P18567]
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−
** [http://www.uniprot.org/uniprot/P00870 P00870]
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** [http://www.uniprot.org/uniprot/P00865 P00865]
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** [http://www.uniprot.org/uniprot/P12468 P12468]
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** [http://www.uniprot.org/uniprot/P24676 P24676]
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** [http://www.uniprot.org/uniprot/P24678 P24678]
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** [http://www.uniprot.org/uniprot/P24679 P24679]
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−
** [http://www.uniprot.org/uniprot/P24675 P24675]
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−
** [http://www.uniprot.org/uniprot/P24677 P24677]
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−
** [http://www.uniprot.org/uniprot/P26962 P26962]
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** [http://www.uniprot.org/uniprot/P10053 P10053]
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−
** [http://www.uniprot.org/uniprot/P05349 P05349]
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−
** [http://www.uniprot.org/uniprot/P07180 P07180]
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−
** [http://www.uniprot.org/uniprot/P08706 P08706]
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−
** [http://www.uniprot.org/uniprot/P07179 P07179]
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−
** [http://www.uniprot.org/uniprot/P19160 P19160]
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−
** [http://www.uniprot.org/uniprot/P11383 P11383]
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−
** [http://www.uniprot.org/uniprot/P07398 P07398]
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−
** [http://www.uniprot.org/uniprot/P26667 P26667]
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−
** [http://www.uniprot.org/uniprot/P00880 P00880]
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−
** [http://www.uniprot.org/uniprot/P04716 P04716]
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−
** [http://www.uniprot.org/uniprot/P00874 P00874]
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−
** [http://www.uniprot.org/uniprot/P05348 P05348]
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−
** [http://www.uniprot.org/uniprot/P14957 P14957]
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−
** [http://www.uniprot.org/uniprot/P13951 P13951]
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** [http://www.uniprot.org/uniprot/P16129 P16129]
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** [http://www.uniprot.org/uniprot/P16130 P16130]
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** [http://www.uniprot.org/uniprot/P04718 P04718]
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** [http://www.uniprot.org/uniprot/P05699 P05699]
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** [http://www.uniprot.org/uniprot/P17537 P17537]
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−
** [http://www.uniprot.org/uniprot/P29684 P29684]
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−
** [http://www.uniprot.org/uniprot/P27569 P27569]
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−
** [http://www.uniprot.org/uniprot/Q9S932 Q9S932]
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−
** [http://www.uniprot.org/uniprot/P26985 P26985]
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** [http://www.uniprot.org/uniprot/Q39387 Q39387]
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** [http://www.uniprot.org/uniprot/Q07087 Q07087]
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−
** [http://www.uniprot.org/uniprot/Q07088 Q07088]
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−
** [http://www.uniprot.org/uniprot/P30401 P30401]
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** [http://www.uniprot.org/uniprot/P14959 P14959]
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** [http://www.uniprot.org/uniprot/Q43874 Q43874]
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** [http://www.uniprot.org/uniprot/P25413 P25413]
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** [http://www.uniprot.org/uniprot/Q32753 Q32753]
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** [http://www.uniprot.org/uniprot/P32764 P32764]
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** [http://www.uniprot.org/uniprot/P31191 P31191]
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** [http://www.uniprot.org/uniprot/P31192 P31192]
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−
** [http://www.uniprot.org/uniprot/P31190 P31190]
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** [http://www.uniprot.org/uniprot/P31195 P31195]
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−
** [http://www.uniprot.org/uniprot/P31194 P31194]
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−
** [http://www.uniprot.org/uniprot/P31193 P31193]
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−
** [http://www.uniprot.org/uniprot/P31196 P31196]
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** [http://www.uniprot.org/uniprot/P31197 P31197]
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** [http://www.uniprot.org/uniprot/P31199 P31199]
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−
** [http://www.uniprot.org/uniprot/P31198 P31198]
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−
** [http://www.uniprot.org/uniprot/P31200 P31200]
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−
** [http://www.uniprot.org/uniprot/P31201 P31201]
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−
** [http://www.uniprot.org/uniprot/P31203 P31203]
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−
** [http://www.uniprot.org/uniprot/P31180 P31180]
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−
** [http://www.uniprot.org/uniprot/P31182 P31182]
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−
** [http://www.uniprot.org/uniprot/P31183 P31183]
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−
** [http://www.uniprot.org/uniprot/P31181 P31181]
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** [http://www.uniprot.org/uniprot/P31184 P31184]
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** [http://www.uniprot.org/uniprot/P31185 P31185]
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** [http://www.uniprot.org/uniprot/P69567 P69567]
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** [http://www.uniprot.org/uniprot/P69568 P69568]
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** [http://www.uniprot.org/uniprot/P69569 P69569]
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** [http://www.uniprot.org/uniprot/P31186 P31186]
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** [http://www.uniprot.org/uniprot/P31188 P31188]
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** [http://www.uniprot.org/uniprot/P37393 P37393]
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** [http://www.uniprot.org/uniprot/P37394 P37394]
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** [http://www.uniprot.org/uniprot/Q31949 Q31949]
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−
** [http://www.uniprot.org/uniprot/Q07049 Q07049]
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** [http://www.uniprot.org/uniprot/Q39985 Q39985]
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** [http://www.uniprot.org/uniprot/P34915 P34915]
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** [http://www.uniprot.org/uniprot/Q08186 Q08186]
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** [http://www.uniprot.org/uniprot/Q08184 Q08184]
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** [http://www.uniprot.org/uniprot/Q08183 Q08183]
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** [http://www.uniprot.org/uniprot/Q04450 Q04450]
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** [http://www.uniprot.org/uniprot/Q43746 Q43746]
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** [http://www.uniprot.org/uniprot/P48711 P48711]
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** [http://www.uniprot.org/uniprot/Q31847 Q31847]
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** [http://www.uniprot.org/uniprot/Q32017 Q32017]
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** [http://www.uniprot.org/uniprot/Q32250 Q32250]
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** [http://www.uniprot.org/uniprot/Q32379 Q32379]
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** [http://www.uniprot.org/uniprot/Q32463 Q32463]
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** [http://www.uniprot.org/uniprot/Q32788 Q32788]
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−
** [http://www.uniprot.org/uniprot/Q32847 Q32847]
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** [http://www.uniprot.org/uniprot/Q32903 Q32903]
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−
** [http://www.uniprot.org/uniprot/Q33040 Q33040]
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−
** [http://www.uniprot.org/uniprot/P54205 P54205]
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−
** [http://www.uniprot.org/uniprot/P54206 P54206]
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** [http://www.uniprot.org/uniprot/P48682 P48682]
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−
** [http://www.uniprot.org/uniprot/Q31809 Q31809]
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−
** [http://www.uniprot.org/uniprot/Q31883 Q31883]
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−
** [http://www.uniprot.org/uniprot/Q31942 Q31942]
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** [http://www.uniprot.org/uniprot/Q31992 Q31992]
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** [http://www.uniprot.org/uniprot/Q32255 Q32255]
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** [http://www.uniprot.org/uniprot/Q32337 Q32337]
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** [http://www.uniprot.org/uniprot/Q32271 Q32271]
+
−
** [http://www.uniprot.org/uniprot/Q32283 Q32283]
+
−
** [http://www.uniprot.org/uniprot/Q32303 Q32303]
+
−
** [http://www.uniprot.org/uniprot/Q32344 Q32344]
+
−
** [http://www.uniprot.org/uniprot/Q32345 Q32345]
+
−
** [http://www.uniprot.org/uniprot/Q32360 Q32360]
+
−
** [http://www.uniprot.org/uniprot/Q32396 Q32396]
+
−
** [http://www.uniprot.org/uniprot/Q32908 Q32908]
+
−
** [http://www.uniprot.org/uniprot/Q33049 Q33049]
+
−
** [http://www.uniprot.org/uniprot/Q33062 Q33062]
+
−
** [http://www.uniprot.org/uniprot/Q33274 Q33274]
+
−
** [http://www.uniprot.org/uniprot/Q33326 Q33326]
+
−
** [http://www.uniprot.org/uniprot/Q33327 Q33327]
+
−
** [http://www.uniprot.org/uniprot/Q33328 Q33328]
+
−
** [http://www.uniprot.org/uniprot/Q33329 Q33329]
+
−
** [http://www.uniprot.org/uniprot/Q33334 Q33334]
+
−
** [http://www.uniprot.org/uniprot/Q33335 Q33335]
+
−
** [http://www.uniprot.org/uniprot/Q33337 Q33337]
+
−
** [http://www.uniprot.org/uniprot/Q33340 Q33340]
+
−
** [http://www.uniprot.org/uniprot/Q33341 Q33341]
+
−
** [http://www.uniprot.org/uniprot/Q33342 Q33342]
+
−
** [http://www.uniprot.org/uniprot/Q33343 Q33343]
+
−
** [http://www.uniprot.org/uniprot/Q33344 Q33344]
+
−
** [http://www.uniprot.org/uniprot/Q33348 Q33348]
+
−
** [http://www.uniprot.org/uniprot/Q33349 Q33349]
+
−
** [http://www.uniprot.org/uniprot/Q33359 Q33359]
+
−
** [http://www.uniprot.org/uniprot/Q33361 Q33361]
+
−
** [http://www.uniprot.org/uniprot/Q33362 Q33362]
+
−
** [http://www.uniprot.org/uniprot/Q33345 Q33345]
+
−
** [http://www.uniprot.org/uniprot/Q33346 Q33346]
+
−
** [http://www.uniprot.org/uniprot/Q33347 Q33347]
+
−
** [http://www.uniprot.org/uniprot/Q36352 Q36352]
+
−
** [http://www.uniprot.org/uniprot/P16881 P16881]
+
−
** [http://www.uniprot.org/uniprot/Q42516 Q42516]
+
−
** [http://www.uniprot.org/uniprot/P48069 P48069]
+
−
** [http://www.uniprot.org/uniprot/P48070 P48070]
+
−
** [http://www.uniprot.org/uniprot/P48072 P48072]
+
−
** [http://www.uniprot.org/uniprot/P48073 P48073]
+
−
** [http://www.uniprot.org/uniprot/P48074 P48074]
+
−
** [http://www.uniprot.org/uniprot/P48075 P48075]
+
−
** [http://www.uniprot.org/uniprot/Q7M2E2 Q7M2E2]
+
−
** [http://www.uniprot.org/uniprot/Q31795 Q31795]
+
−
** [http://www.uniprot.org/uniprot/P28399 P28399]
+
−
** [http://www.uniprot.org/uniprot/Q37700 Q37700]
+
−
** [http://www.uniprot.org/uniprot/P51226 P51226]
+
−
** [http://www.uniprot.org/uniprot/Q43832 Q43832]
+
−
** [http://www.uniprot.org/uniprot/P49521 P49521]
+
−
** [http://www.uniprot.org/uniprot/P49520 P49520]
+
−
** [http://www.uniprot.org/uniprot/O22487 O22487]
+
−
** [http://www.uniprot.org/uniprot/Q37247 Q37247]
+
−
** [http://www.uniprot.org/uniprot/Q41580 Q41580]
+
−
** [http://www.uniprot.org/uniprot/P18062 P18062]
+
−
** [http://www.uniprot.org/uniprot/P41621 P41621]
+
−
** [http://www.uniprot.org/uniprot/O65194 O65194]
+
−
** [http://www.uniprot.org/uniprot/P50922 P50922]
+
−
** [http://www.uniprot.org/uniprot/Q41406 Q41406]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: ec number=EC-4.1.1.39}}
+
−
{{#set: gene associated=Tiso_gene_12199}}
+
−
{{#set: in pathway=PWY-5532|CALVIN-PWY|PWY-5723}}
+
−
{{#set: reconstruction category=orthology|manual}}
+
−
{{#set: reconstruction source=manual-primary_network|orthology-esiliculosus}}
+
−
{{#set: reconstruction tool=pantograph}}
+

Latest revision as of 20:23, 21 March 2018

Gene Tiso_gene_7953

  • right end position:
    • 10584
  • transcription direction:
    • POSITIVE
  • left end position:
    • 7945
  • centisome position:
    • 74.461105
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_7953&oldid=48338"