Difference between revisions of "RXN-16082"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN] == * direction:...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16082 RXN-16082] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16082 RXN-16082] ==
 
* direction:
 
* direction:
** REVERSIBLE
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** LEFT-TO-RIGHT
* common name:
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** acetylornithine_aminotransferase
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* ec number:
 
* ec number:
** [http://enzyme.expasy.org/EC/2.6.1.44 EC-2.6.1.44]
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** [http://enzyme.expasy.org/EC/2.3.1 EC-2.3.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[GLYOX]][c] '''+''' 1 [[L-ALPHA-ALANINE]][c] '''<=>''' 1 [[GLY]][c] '''+''' 1 [[PYRUVATE]][c]
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** 1 [[CPD-14426]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[MALONYL-COA]][c] '''=>''' 1 [[CPD-17332]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
 
* With common name(s):
 
* With common name(s):
** 1 glyoxylate[c] '''+''' 1 L-alanine[c] '''<=>''' 1 glycine[c] '''+''' 1 pyruvate[c]
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** 1 docosapentaenoyl-CoA[c] '''+''' 1 H+[c] '''+''' 1 malonyl-CoA[c] '''=>''' 1 3-oxo-tetracosapentaenoyl-CoA[c] '''+''' 1 coenzyme A[c] '''+''' 1 CO2[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
Genes have been associated with this reaction based on different elements listed below.
 
* Gene: [[Tiso_gene_6134]]
 
** Source: [[orthology-esiliculosus]]
 
* Gene: [[Tiso_gene_5726]]
 
** Source: [[orthology-athaliana]]
 
* Gene: [[Tiso_gene_11231]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Assignment: EC-NUMBER
 
** Source: [[annotation-experimental_annotation]]
 
*** Assignment: EC-NUMBER
 
** Source: [[orthology-esiliculosus]]
 
 
== Pathways  ==
 
== Pathways  ==
* [[GLYSYN-ALA-PWY]], glycine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=GLYSYN-ALA-PWY GLYSYN-ALA-PWY]
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* [[PWY-7606]], docosahexaenoate biosynthesis III (6-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7606 PWY-7606]
** '''1''' reactions found over '''1''' reactions in the full pathway
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** '''14''' reactions found over '''14''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* Category: [[orthology]]
 
** Source: [[orthology-athaliana]]
 
*** Tool: [[pantograph]]
 
** Source: [[orthology-esiliculosus]]
 
*** Tool: [[pantograph]]
 
* Category: [[manual]]
 
** Source: [[manual-primary_network]]
 
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
* RHEA:
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{{#set: direction=LEFT-TO-RIGHT}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24248 24248]
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{{#set: ec number=EC-2.3.1}}
* LIGAND-RXN:
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{{#set: in pathway=PWY-7606}}
** [http://www.genome.jp/dbget-bin/www_bget?R00369 R00369]
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{{#set: reconstruction category=annotation}}
* UNIPROT:
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
** [http://www.uniprot.org/uniprot/P31029 P31029]
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{{#set: reconstruction tool=pathwaytools}}
** [http://www.uniprot.org/uniprot/P31030 P31030]
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** [http://www.uniprot.org/uniprot/P41689 P41689]
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** [http://www.uniprot.org/uniprot/Q94055 Q94055]
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** [http://www.uniprot.org/uniprot/Q56YA5 Q56YA5]
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** [http://www.uniprot.org/uniprot/P21549 P21549]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=acetylornithine_aminotransferase}}
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{{#set: ec number=EC-2.6.1.44}}
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{{#set: gene associated=Tiso_gene_6134|Tiso_gene_5726|Tiso_gene_11231}}
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{{#set: in pathway=GLYSYN-ALA-PWY}}
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{{#set: reconstruction category=orthology|manual|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|orthology-athaliana|annotation-experimental_annotation|manual-primary_network|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 20:24, 21 March 2018

Reaction RXN-16082

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Pathways

  • PWY-7606, docosahexaenoate biosynthesis III (6-desaturase, mammals): PWY-7606
    • 14 reactions found over 14 reactions in the full pathway

Reconstruction information

External links