Difference between revisions of "CHC T00009198001"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-ISOPROPYLMALISOM-RXN 3-ISOPROPYLMALISOM-RXN] == * direction: ** REVERSIBLE * common name: ** 3-is...")
(Created page with "Category:Gene == Gene CHC_T00009198001 == * left end position: ** 118881 * transcription direction: ** NEGATIVE * right end position: ** 120794 * centisome position: ** 70...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-ISOPROPYLMALISOM-RXN 3-ISOPROPYLMALISOM-RXN] ==
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== Gene CHC_T00009198001 ==
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* direction:
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* left end position:
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** REVERSIBLE
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** 118881
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* common name:
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* transcription direction:
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** 3-isopropylmalate dehydratase
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** NEGATIVE
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** 3-isopropylmalate dehydratase small subunit
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* right end position:
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** 120794
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* centisome position:
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** 70.52532   
 
* Synonym(s):
 
* Synonym(s):
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** (2R,3S)-3-isopropylmalate hydro-lyase
 
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** β-isopropylmalate dehydratase
 
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** α-isopropylmalate isomerase
 
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** 3-isopropylmalate hydro-lyase
 
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[FORMATETHFLIG-RXN]]
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** 1 [[CPD-9451]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[3-CARBOXY-3-HYDROXY-ISOCAPROATE]][c]
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** Source: [[annotation-original_genome]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 2-isopropylmaleate[c] '''+''' 1 H2O[c] '''<=>''' 1 (2S)-2-isopropylmalate[c]
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== Pathways associated ==
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* [[PWY-2201]]
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== Genes associated with this reaction  ==
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* [[PWY-1722]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[CODH-PWY]]
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* [[CHC_T00009184001_1]]
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* [[PWY-3841]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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* [[PWY-2161]]
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** [[pantograph]]-[[a.taliana]]
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* [[CHC_T00009087001]]
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** ORIGINAL_GENOME
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***AUTOMATED-NAME-MATCH
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* [[CHC_T00009087001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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** [[pantograph]]-[[a.taliana]]
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* [[CHC_T00009184001]]
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** ORIGINAL_GENOME
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[LEUSYN-PWY]], L-leucine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=LEUSYN-PWY LEUSYN-PWY]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-6871]], 3-methylbutanol biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6871 PWY-6871]
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** '''7''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[galdieria.sulphuraria]]
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*** [[a.taliana]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[original_genome]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=118881}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16293 16293]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=120794}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03968 R03968]
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{{#set: centisome position=70.52532    }}
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* UNIPROT:
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{{#set: reaction associated=FORMATETHFLIG-RXN}}
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** [http://www.uniprot.org/uniprot/Q9PLW1 Q9PLW1]
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{{#set: pathway associated=PWY-2201|PWY-1722|CODH-PWY|PWY-3841|PWY-2161}}
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** [http://www.uniprot.org/uniprot/Q9JU82 Q9JU82]
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** [http://www.uniprot.org/uniprot/P80858 P80858]
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** [http://www.uniprot.org/uniprot/Q9UZ07 Q9UZ07]
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** [http://www.uniprot.org/uniprot/Q9JU81 Q9JU81]
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** [http://www.uniprot.org/uniprot/Q58673 Q58673]
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** [http://www.uniprot.org/uniprot/Q02144 Q02144]
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** [http://www.uniprot.org/uniprot/P44968 P44968]
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** [http://www.uniprot.org/uniprot/Q58667 Q58667]
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** [http://www.uniprot.org/uniprot/P44438 P44438]
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** [http://www.uniprot.org/uniprot/P0A6A6 P0A6A6]
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** [http://www.uniprot.org/uniprot/Q9PLW2 Q9PLW2]
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** [http://www.uniprot.org/uniprot/Q44022 Q44022]
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** [http://www.uniprot.org/uniprot/Q44023 Q44023]
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** [http://www.uniprot.org/uniprot/Q44427 Q44427]
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** [http://www.uniprot.org/uniprot/P17279 P17279]
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** [http://www.uniprot.org/uniprot/P04787 P04787]
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** [http://www.uniprot.org/uniprot/P15717 P15717]
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** [http://www.uniprot.org/uniprot/P18250 P18250]
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** [http://www.uniprot.org/uniprot/Q02142 Q02142]
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** [http://www.uniprot.org/uniprot/P30126 P30126]
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** [http://www.uniprot.org/uniprot/P50181 P50181]
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** [http://www.uniprot.org/uniprot/P07264 P07264]
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** [http://www.uniprot.org/uniprot/P74207 P74207]
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** [http://www.uniprot.org/uniprot/O86534 O86534]
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** [http://www.uniprot.org/uniprot/O86535 O86535]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=3-isopropylmalate dehydratase}}
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{{#set: common name=3-isopropylmalate dehydratase small subunit}}
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{{#set: common name=(2R,3S)-3-isopropylmalate hydro-lyase|&beta;-isopropylmalate dehydratase|&alpha;-isopropylmalate isomerase|3-isopropylmalate hydro-lyase}}
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{{#set: gene associated=CHC_T00009184001_1|CHC_T00009087001|CHC_T00009087001_1|CHC_T00009184001}}
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{{#set: in pathway=LEUSYN-PWY|PWY-6871}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=galdieria.sulphuraria|a.taliana}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=original_genome}}
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Revision as of 15:56, 23 May 2018

Gene CHC_T00009198001

  • left end position:
    • 118881
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 120794
  • centisome position:
    • 70.52532
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=CHC_T00009198001&oldid=15757"