RIB5PISOM-RXN

Reaction RIB5PISOM-RXN

• ec number:
  • EC-5.3.1.6
• direction:
  • REVERSIBLE
• common name:
  • ribose-5-phosphate isomerase
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 RIBOSE-5P[c] <=> 1 RIBULOSE-5P[c]
• With common name(s):
  • 1 D-ribose 5-phosphate[c] <=> 1 D-ribulose 5-phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: g5576.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-arabidopsis_thaliana
  • Source: orthology-arabidopsis_thaliana
  • Source: orthology-saccharina_japonica

Pathways

• CALVIN-PWY, Calvin-Benson-Bassham cycle: CALVIN-PWY
  • 12 reactions found over 13 reactions in the full pathway
• P185-PWY, formaldehyde assimilation III (dihydroxyacetone cycle): P185-PWY
  • 11 reactions found over 12 reactions in the full pathway
• P124-PWY, Bifidobacterium shunt: P124-PWY
  • 12 reactions found over 15 reactions in the full pathway
• PWY-1861, formaldehyde assimilation II (assimilatory RuMP Cycle): PWY-1861
  • 7 reactions found over 9 reactions in the full pathway
• NONOXIPENT-PWY, pentose phosphate pathway (non-oxidative branch): NONOXIPENT-PWY
  • 5 reactions found over 5 reactions in the full pathway
• PWY-5723, Rubisco shunt: PWY-5723
  • 10 reactions found over 10 reactions in the full pathway

Reconstruction information

• Category: orthology
  • Source: orthology-saccharina_japonica
    • Tool: pantograph
  • Source: orthology-ectocarpus_siliculosus
    • Tool: pantograph
  • Source: orthology-arabidopsis_thaliana
    • Tool: pantograph
• Category: annotation
  • Source: annotation-cladosiphon_okamuranus
    • Tool: pathwaytools

External links

• UNIPROT:
  • P0A7Z0
  • Q9CDI7
  • P44725
  • Q58998
  • Q9JTM5
  • Q9PP08
  • P37351
  • P74234
  • Q55766
• RHEA:
  • 14660
• LIGAND-RXN:
  • R01056