RXN-12969

Reaction RXN-12969

• ec number:
  • EC-4.2.1.134
• direction:
  • LEFT-TO-RIGHT
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 CPD-14405[c] => 1 CPD-14406[c] + 1 WATER[c]
• With common name(s):
  • 1 3R-hydroxy-dihomo γ-linolenoyl-CoA[c] => 1 (2E,8Z,11Z,14Z)-icosatetraenoyl-CoA[c] + 1 H2O[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: g8153.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-saccharina_japonica
• Gene: g16356.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-saccharina_japonica

Pathways

• PWY-5353, arachidonate biosynthesis I (6-desaturase, lower eukaryotes): PWY-5353
  • 5 reactions found over 8 reactions in the full pathway
• PWY-7592, arachidonate biosynthesis III (6-desaturase, mammals): PWY-7592
  • 3 reactions found over 7 reactions in the full pathway

Reconstruction information

• Category: annotation
  • Source: annotation-cladosiphon_okamuranus
    • Tool: pathwaytools
• Category: orthology
  • Source: orthology-saccharina_japonica
    • Tool: pantograph