RXN-8042

Reaction RXN-8042

• ec number:
  • EC-5.2.1.13
• direction:
  • LEFT-TO-RIGHT
• common name:
  • prolycopene isomerase
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 CPD-7496[c] => 1 CPD1F-114[c]
• With common name(s):
  • 1 prolycopene[c] => 1 all-trans-lycopene[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: g8850.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-saccharina_japonica
• Gene: g3865.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER

Pathways

• PWY-6475, trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria): PWY-6475
  • 8 reactions found over 8 reactions in the full pathway

Reconstruction information

• Category: orthology
  • Source: orthology-saccharina_japonica
    • Tool: pantograph
• Category: annotation
  • Source: annotation-cladosiphon_okamuranus
    • Tool: pathwaytools

External links

• RHEA:
  • 30974
• LIGAND-RXN:
  • R07512