TRYPSYN-RXN

Reaction TRYPSYN-RXN

• ec number:
  • EC-4.2.1.20
• direction:
  • LEFT-TO-RIGHT
• common name:
  • tryptophan synthase
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 SER[c] + 1 INDOLE-3-GLYCEROL-P[c] => 1 TRP[c] + 1 WATER[c] + 1 GAP[c]
• With common name(s):
  • 1 L-serine[c] + 1 (1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate[c] => 1 L-tryptophan[c] + 1 H2O[c] + 1 D-glyceraldehyde 3-phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: g3274.t1
  • Source: annotation-cladosiphon_okamuranus
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-nannochloropsis_salina
  • Source: orthology-arabidopsis_thaliana
  • Source: orthology-saccharina_japonica
• Gene: g9823.t1
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g4726.t1
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g18704.t2
  • Source: orthology-ectocarpus_siliculosus
• Gene: g4551.t1
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g18704.t1
  • Source: orthology-ectocarpus_siliculosus
• Gene: g8503.t1
  • Source: orthology-ectocarpus_siliculosus
  • Source: orthology-saccharina_japonica
• Gene: g18704.t3
  • Source: orthology-ectocarpus_siliculosus

Reconstruction information

• Category: orthology
  • Source: orthology-saccharina_japonica
    • Tool: pantograph
  • Source: orthology-ectocarpus_siliculosus
    • Tool: pantograph
  • Source: orthology-nannochloropsis_salina
    • Tool: pantograph
  • Source: orthology-arabidopsis_thaliana
    • Tool: pantograph
• Category: annotation
  • Source: annotation-cladosiphon_okamuranus
    • Tool: pathwaytools

External links

• UNIPROT:
  • P11081
  • P14671
  • P13228
  • P18284
  • P43759
  • O84172
  • P11080
  • P16608
  • P18285
  • P16706
  • P12290
  • P42391
  • Q9PIF2
  • P12291
  • P42389
  • Q60179
  • Q9PIF1
  • P07600
  • P07601
  • P06561
  • P56142
  • P06562
  • O27696
  • O28672
  • O66923
  • Q9JVC0
  • P43760
  • P34817
  • P34816
  • P17167
  • P17166
  • P19868
  • P19867
  • P16578
  • P43283
  • P43284
  • Q57011
  • P31204
  • Q01998
  • Q01997
  • P34793
  • P42390
  • P50909
  • Q42529
  • P51382
  • P77960
  • Q59992
  • O22765
  • O04225
  • P25269
  • O64991
  • O05625
  • O13831
  • Q9YGB0
  • Q9YGA9
  • Q9X7C8
  • P00931
  • P00929
  • P0A2K1
  • P0A877
  • P0A879
• RHEA:
  • 10533
• LIGAND-RXN:
  • R02722