Difference between revisions of "B471 RS0108585"
From metabolic_network
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Model summary: [[MEDIA:SCutipay_final.txt|summary]] | Model summary: [[MEDIA:SCutipay_final.txt|summary]] | ||
| − | Download '''AuReMe''' Input/Output [https://mybox.inria.fr/f/dd66702d2a/?raw=1] | + | Download '''AuReMe''' Input/Output [https://mybox.inria.fr/f/dd66702d2a/?raw=1 data] |
The automatic reconstruction of ''S_thermosulfidooxidans_str_Cutipay'' results to a Genome scale [[MEDIA:SCutipay_lvl3.xml|Model]] containing 1067 reactions, 854 metabolites, 541 genes and 108 pathways. This GeM was obtained based on the following sources: | The automatic reconstruction of ''S_thermosulfidooxidans_str_Cutipay'' results to a Genome scale [[MEDIA:SCutipay_lvl3.xml|Model]] containing 1067 reactions, 854 metabolites, 541 genes and 108 pathways. This GeM was obtained based on the following sources: | ||
Revision as of 14:25, 12 January 2018
CUTIGEM description
Automatic reconstruction with AuReMe
Model summary: summary
Download AuReMe Input/Output data
The automatic reconstruction of S_thermosulfidooxidans_str_Cutipay results to a Genome scale Model containing 1067 reactions, 854 metabolites, 541 genes and 108 pathways. This GeM was obtained based on the following sources:
- Based on orthology data:
- Tool: Pantograph
- From template AFERROOXIDANS creation of a metabolic network containing: 220 reactions
- From template CLJUNGDAHLII creation of a metabolic network containing: 338 reactions
- From template BSUBTILIS creation of a metabolic network containing: 459 reactions
- Tool: Pantograph
- Based on expertise:
- 405 reaction(s) added
