Difference between revisions of "Acmam"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/EX_murein4px4px4p EX_murein4px4px4p] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Fo...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/GNK GNK] == * direction: ** LEFT-TO-RIGHT * common name: ** Gluconokinase * Synonym(s): == Reactio...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/EX_murein4px4px4p EX_murein4px4px4p] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/GNK GNK] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** Gluconokinase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[murein4px4px4p]][e] '''=>'''  
+
** 1.0 [[glcn]][c] '''+''' 1.0 [[atp]][c] '''=>''' 1.0 [[6pgc]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[adp]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 Three disacharide linked murein units (tetrapeptide crosslinked tetrapeptide (A2pm->D-ala) & tetrapeptide corsslinked tetrapeptide (A2pm->D-ala)) (middle of chain)[e] '''=>'''  
+
** 1.0 D-Gluconate[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''=>''' 1.0 6-Phospho-D-gluconate[c] '''+''' 1.0 H+[c] '''+''' 1.0 ADP C10H12N5O10P2[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[B471_RS0113565]]
 +
** [[pantograph]]-[[cljungdahlii]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 +
** '''471''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 +
** '''212''' reactions found over '''1054''' reactions in the full pathway
 +
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
 +
** '''101''' reactions found over '''715''' reactions in the full pathway
 +
* [[map01200]]: [http://www.genome.jp/dbget-bin/www_bget?map01200 map01200]
 +
** '''51''' reactions found over '''220''' reactions in the full pathway
 +
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 +
** '''148''' reactions found over '''694''' reactions in the full pathway
 +
* [[map00030]]: [http://www.genome.jp/dbget-bin/www_bget?map00030 map00030]
 +
** '''20''' reactions found over '''69''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[manual]]:
+
* Category: [[orthology]]
** [[reaction from orthology templates not found by pantograph]]
+
** Source: [[orthology-cljungdahlii]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19433 19433]
 +
* EC Number : 2.7.1.12
 +
* MetaNetX (MNX) Equation : MNXR100390
 +
* KEGG Reaction : R01737
 +
* BioCyc : META:GLUCONOKIN-RXN
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: in pathway=}}
+
{{#set: common name=Gluconokinase}}
{{#set: reconstruction category=manual}}
+
{{#set: gene associated=B471_RS0113565}}
{{#set: reconstruction source=reaction from orthology templates not found by pantograph}}
+
{{#set: in pathway=map01100|map01110|map01120|map01200|map01130|map00030}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-cljungdahlii}}
 +
{{#set: reconstruction tool=pantograph}}

Revision as of 23:32, 20 March 2018

Reaction GNK

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Gluconokinase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 D-Gluconate[c] + 1.0 ATP C10H12N5O13P3[c] => 1.0 6-Phospho-D-gluconate[c] + 1.0 H+[c] + 1.0 ADP C10H12N5O10P2[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • EC Number : 2.7.1.12
  • MetaNetX (MNX) Equation : MNXR100390
  • KEGG Reaction : R01737
  • BioCyc : META:GLUCONOKIN-RXN