Difference between revisions of "Dudp"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ACCOAC ACCOAC] == * direction: ** LEFT-TO-RIGHT * common name: ** Acetyl-CoA carboxylase * Synonym(...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/SELNPS SELNPS] == * direction: ** LEFT-TO-RIGHT * common name: ** Selenophosphate synthase * Synony...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/ACCOAC ACCOAC] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/SELNPS SELNPS] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Acetyl-CoA carboxylase
+
** Selenophosphate synthase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[atp]][c] '''+''' 1.0 [[accoa]][c] '''+''' 1.0 [[hco3]][c] '''=>''' 1.0 [[malcoa]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[adp]][c] '''+''' 1.0 [[pi]][c]
+
** 1.0 [[atp]][c] '''+''' 1.0 [[seln]][c] '''+''' 1.0 [[h2o]][c] '''=>''' 1.0 [[selnp]][c] '''+''' 1.0 [[amp]][c] '''+''' 1.0 [[pi]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 Acetyl-CoA[c] '''+''' 1.0 Bicarbonate[c] '''=>''' 1.0 Malonyl CoA C24H33N7O19P3S[c] '''+''' 1.0 H+[c] '''+''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 Phosphate[c]
+
** 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 Selenide[c] '''+''' 1.0 H2O H2O[c] '''=>''' 1.0 Selenophosphate[c] '''+''' 1.0 AMP C10H12N5O7P[c] '''+''' 1.0 Phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[B471_RS0101860]]
+
* [[B471_RS0110820]]
−
** [[pantograph]]-[[aferrooxidans]]
+
** [[pantograph]]-[[cljungdahlii]]
−
* [[B471_RS0108915]]
+
−
** [[pantograph]]-[[aferrooxidans]]
+
−
* [[B471_RS0108925]]
+
−
** [[pantograph]]-[[aferrooxidans]]
+
−
* [[B471_RS0108400]]
+
−
** [[pantograph]]-[[aferrooxidans]]
+
 
== Pathways  ==
 
== Pathways  ==
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
−
** '''472''' reactions found over '''2349''' reactions in the full pathway
+
** '''471''' reactions found over '''2349''' reactions in the full pathway
−
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
+
* [[map00450]]: [http://www.genome.jp/dbget-bin/www_bget?map00450 map00450]
−
** '''212''' reactions found over '''1054''' reactions in the full pathway
+
** '''6''' reactions found over '''35''' reactions in the full pathway
−
* [[map00640]]: [http://www.genome.jp/dbget-bin/www_bget?map00640 map00640]
+
−
** '''15''' reactions found over '''143''' reactions in the full pathway
+
−
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
+
−
** '''101''' reactions found over '''715''' reactions in the full pathway
+
−
* [[map01212]]: [http://www.genome.jp/dbget-bin/www_bget?map01212 map01212]
+
−
** '''43''' reactions found over '''182''' reactions in the full pathway
+
−
* [[map01200]]: [http://www.genome.jp/dbget-bin/www_bget?map01200 map01200]
+
−
** '''51''' reactions found over '''220''' reactions in the full pathway
+
−
* [[map00620]]: [http://www.genome.jp/dbget-bin/www_bget?map00620 map00620]
+
−
** '''22''' reactions found over '''163''' reactions in the full pathway
+
−
* [[map00061]]: [http://www.genome.jp/dbget-bin/www_bget?map00061 map00061]
+
−
** '''54''' reactions found over '''160''' reactions in the full pathway
+
−
* [[map00254]]: [http://www.genome.jp/dbget-bin/www_bget?map00254 map00254]
+
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
−
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
+
−
** '''148''' reactions found over '''694''' reactions in the full pathway
+
−
* [[map00720]]: [http://www.genome.jp/dbget-bin/www_bget?map00720 map00720]
+
−
** '''25''' reactions found over '''157''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-cljungdahlii]]
−
*** [[aferrooxidans]]
+
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11308 11308]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18737 18737]
−
* BioCyc : META:ACETYL-COA-CARBOXYLTRANSFER-RXN
+
* EC Number : 2.7.9.3
−
* MetaNetX (MNX) Equation : MNXR95219
+
* MetaNetX (MNX) Equation : MNXR104322
−
* KEGG Reaction : R00742
+
* KEGG Reaction : R03595
−
* EC Number : 6.4.1.2
+
* BioCyc : META:2.7.9.3-RXN
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Acetyl-CoA carboxylase}}
+
{{#set: common name=Selenophosphate synthase}}
−
{{#set: gene associated=B471_RS0101860|B471_RS0108915|B471_RS0108925|B471_RS0108400}}
+
{{#set: gene associated=B471_RS0110820}}
−
{{#set: in pathway=map01100|map01110|map00640|map01120|map01212|map01200|map00620|map00061|map00254|map01130|map00720}}
+
{{#set: in pathway=map01100|map00450}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-cljungdahlii}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=aferrooxidans}}
 

Revision as of 00:34, 21 March 2018

Reaction SELNPS

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Selenophosphate synthase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 ATP C10H12N5O13P3[c] + 1.0 Selenide[c] + 1.0 H2O H2O[c] => 1.0 Selenophosphate[c] + 1.0 AMP C10H12N5O7P[c] + 1.0 Phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • EC Number : 2.7.9.3
  • MetaNetX (MNX) Equation : MNXR104322
  • KEGG Reaction : R03595
  • BioCyc : META:2.7.9.3-RXN




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