Difference between revisions of "Dcmp"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/DAPDC DAPDC] == * direction: ** LEFT-TO-RIGHT * common name: ** Diaminopimelate decarboxylase * Syn...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/FOLt FOLt] == * direction: ** REVERSIBLE * common name: ** Folate transport via proton simport * Sy...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/DAPDC DAPDC] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/FOLt FOLt] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** Diaminopimelate decarboxylase
+
** Folate transport via proton simport
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[h]][c] '''+''' 1.0 [[26dap__M]][c] '''=>''' 1.0 [[lys__L]][c] '''+''' 1.0 [[co2]][c]
+
** 1.0 [[h]][e] '''+''' 1.0 [[fol]][e] '''<=>''' 1.0 [[h]][c] '''+''' 1.0 [[fol]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 H+[c] '''+''' 1.0 Meso-2,6-Diaminoheptanedioate[c] '''=>''' 1.0 L-Lysine[c] '''+''' 1.0 CO2 CO2[c]
+
** 1.0 H+[e] '''+''' 1.0 Folate[e] '''<=>''' 1.0 H+[c] '''+''' 1.0 Folate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[B471_RS0101130]]
 
−
** [[pantograph]]-[[cljungdahlii]]
 
−
** [[pantograph]]-[[bsubtilis]]
 
−
** [[pantograph]]-[[aferrooxidans]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
−
** '''472''' reactions found over '''2349''' reactions in the full pathway
 
−
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 
−
** '''212''' reactions found over '''1054''' reactions in the full pathway
 
−
* [[map00300]]: [http://www.genome.jp/dbget-bin/www_bget?map00300 map00300]
 
−
** '''10''' reactions found over '''34''' reactions in the full pathway
 
−
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
 
−
** '''101''' reactions found over '''715''' reactions in the full pathway
 
−
* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
 
−
** '''78''' reactions found over '''228''' reactions in the full pathway
 
−
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 
−
** '''148''' reactions found over '''694''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[manual]]
−
** [[pantograph]]:
+
** Source: [[manual-reaction_to_add_delete]]
−
*** [[aferrooxidans]]
+
*** Comment: [[reaction added from literature evidence or biological expertise]]
−
*** [[cljungdahlii]]
+
−
*** [[bsubtilis]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* MetaNetX (MNX) Equation : MNXR99612
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15101 15101]
+
{{#set: direction=REVERSIBLE}}
−
* BioCyc : META:DIAMINOPIMDECARB-RXN
+
{{#set: common name=Folate transport via proton simport}}
−
* MetaNetX (MNX) Equation : MNXR97141
+
{{#set: in pathway=}}
−
* KEGG Reaction : R00451
+
{{#set: reconstruction category=manual}}
−
* EC Number : 4.1.1.20
+
{{#set: reconstruction source=manual-reaction_to_add_delete}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: reconstruction comment=reaction added from literature evidence or biological expertise}}
−
{{#set: common name=Diaminopimelate decarboxylase}}
+
−
{{#set: gene associated=B471_RS0101130}}
+
−
{{#set: in pathway=map01100|map01110|map00300|map01120|map01230|map01130}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=aferrooxidans|cljungdahlii|bsubtilis}}
+

Revision as of 00:35, 21 March 2018

Reaction FOLt

  • direction:
    • REVERSIBLE
  • common name:
    • Folate transport via proton simport
  • Synonym(s):

Reaction Formula

  • With identifiers:
    • 1.0 h[e] + 1.0 fol[e] <=> 1.0 h[c] + 1.0 fol[c]
  • With common name(s):
    • 1.0 H+[e] + 1.0 Folate[e] <=> 1.0 H+[c] + 1.0 Folate[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links

  • MetaNetX (MNX) Equation : MNXR99612




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