Difference between revisions of "Octdp"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/NNATr_CUT NNATr_CUT] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/AGPAT120 AGPAT120] == * direction: ** LEFT-TO-RIGHT * common name: ** 1-tetradecanoyl-sn-glycerol 3...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/NNATr_CUT NNATr_CUT] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/AGPAT120 AGPAT120] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** 1-tetradecanoyl-sn-glycerol 3-phosphate O-acyltransferase (n-C12:0)
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[atp]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[nicrnt]][c] '''=>''' 1.0 [[ppi]][c] '''+''' 1.0 [[dnad]][c]
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** 1.0 [[ddcaACP]][c] '''+''' 1.0 [[1ddecg3p]][c] '''=>''' 1.0 [[ACP]][c] '''+''' 1.0 [[pa120]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 H+[c] '''+''' 1.0 Nicotinate D-ribonucleotide[c] '''=>''' 1.0 Diphosphate[c] '''+''' 1.0 Deamino-NAD+[c]
+
** 1.0 Dodecanoyl-ACP (n-C12:0ACP)[c] '''+''' 1.0 1-dodecanoyl-sn-glycerol 3-phosphate[c] '''=>''' 1.0 Acyl carrier protein[c] '''+''' 1.0 1,2-didodecanoyl-sn-glycerol 3-phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[B471_RS0119010]]
+
* [[B471_RS0101020]]
** MANUAL
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** [[pantograph]]-[[cljungdahlii]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 +
** '''471''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map00564]]: [http://www.genome.jp/dbget-bin/www_bget?map00564 map00564]
 +
** '''36''' reactions found over '''134''' reactions in the full pathway
 +
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 +
** '''212''' reactions found over '''1054''' reactions in the full pathway
 +
* [[map00561]]: [http://www.genome.jp/dbget-bin/www_bget?map00561 map00561]
 +
** '''9''' reactions found over '''83''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[manual]]:
+
* Category: [[orthology]]
** [[reaction found from orthology but we fixed reversibility based on biological expertise]]
+
** Source: [[orthology-cljungdahlii]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 +
* MetaNetX (MNX) Equation : MNXR95558
 +
* EC Number : 2.3.1.51
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: gene associated=B471_RS0119010}}
+
{{#set: common name=1-tetradecanoyl-sn-glycerol 3-phosphate O-acyltransferase (n-C12:0)}}
{{#set: in pathway=}}
+
{{#set: gene associated=B471_RS0101020}}
{{#set: reconstruction category=manual}}
+
{{#set: in pathway=map01100|map00564|map01110|map00561}}
{{#set: reconstruction source=reaction found from orthology but we fixed reversibility based on biological expertise}}
+
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-cljungdahlii}}
 +
{{#set: reconstruction tool=pantograph}}

Revision as of 23:36, 20 March 2018

Reaction AGPAT120

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 1-tetradecanoyl-sn-glycerol 3-phosphate O-acyltransferase (n-C12:0)
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Dodecanoyl-ACP (n-C12:0ACP)[c] + 1.0 1-dodecanoyl-sn-glycerol 3-phosphate[c] => 1.0 Acyl carrier protein[c] + 1.0 1,2-didodecanoyl-sn-glycerol 3-phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • MetaNetX (MNX) Equation : MNXR95558
  • EC Number : 2.3.1.51