Difference between revisions of "3otdcoa"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/GND GND] == * direction: ** LEFT-TO-RIGHT * common name: ** Phosphogluconate dehydrogenase * Synony...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PSD120_CUT PSD120_CUT] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * Wit...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://bigg.ucsd.edu/universal/reactions/GND GND] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/PSD120_CUT PSD120_CUT] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** Phosphogluconate dehydrogenase
 
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[6pgc]][c] '''+''' 1.0 [[nadp]][c] '''=>''' 1.0 [[co2]][c] '''+''' 1.0 [[nadph]][c] '''+''' 1.0 [[ru5p__D]][c]
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** 1.0 [[ps120]][c] '''+''' 2.0 [[h]][c] '''=>''' 1.0 [[pe120]][c] '''+''' 1.0 [[co2]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 6-Phospho-D-gluconate[c] '''+''' 1.0 Nicotinamide adenine dinucleotide phosphate[c] '''=>''' 1.0 CO2 CO2[c] '''+''' 1.0 Nicotinamide adenine dinucleotide phosphate - reduced[c] '''+''' 1.0 D-Ribulose 5-phosphate[c]
+
** 1.0 Phosphatidylserine (didodecanoyl, n-C12:0)[c] '''+''' 2.0 H+[c] '''=>''' 1.0 Phosphatidylethanolamine (didodecanoyl, n-C12:0)[c] '''+''' 1.0 CO2 CO2[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[B471_RS0108280]]
 
−
** [[pantograph]]-[[cljungdahlii]]
 
−
* [[B471_RS0107325]]
 
−
** [[pantograph]]-[[cljungdahlii]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
−
** '''472''' reactions found over '''2349''' reactions in the full pathway
 
−
* [[map00480]]: [http://www.genome.jp/dbget-bin/www_bget?map00480 map00480]
 
−
** '''10''' reactions found over '''39''' reactions in the full pathway
 
−
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 
−
** '''212''' reactions found over '''1054''' reactions in the full pathway
 
−
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
 
−
** '''101''' reactions found over '''715''' reactions in the full pathway
 
−
* [[map01200]]: [http://www.genome.jp/dbget-bin/www_bget?map01200 map01200]
 
−
** '''51''' reactions found over '''220''' reactions in the full pathway
 
−
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 
−
** '''148''' reactions found over '''694''' reactions in the full pathway
 
−
* [[map00030]]: [http://www.genome.jp/dbget-bin/www_bget?map00030 map00030]
 
−
** '''20''' reactions found over '''69''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[manual]]
−
** [[pantograph]]:
+
** Source: [[manual-missing_rxn_creator]]
−
*** [[cljungdahlii]]
+
*** Comment: [[reactions originally found with orthology but modified following biological expertise]]
 
== External links  ==
 
== External links  ==
−
* EC Number : 1.1.1.351
 
−
* BioCyc : META:RXN-9952
 
−
* MetaNetX (MNX) Equation : MNXR100389
 
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10116 10116]
 
−
* Reactome : REACT_R-ATH-71299
 
−
* KEGG Reaction : R01528
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Phosphogluconate dehydrogenase}}
+
{{#set: in pathway=}}
−
{{#set: gene associated=B471_RS0108280|B471_RS0107325}}
+
{{#set: reconstruction category=manual}}
−
{{#set: in pathway=map01100|map00480|map01110|map01120|map01200|map01130|map00030}}
+
{{#set: reconstruction source=manual-missing_rxn_creator}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction comment=reactions originally found with orthology but modified following biological expertise}}
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=cljungdahlii}}
+

Revision as of 23:36, 20 March 2018

Reaction PSD120_CUT

  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Phosphatidylserine (didodecanoyl, n-C12:0)[c] + 2.0 H+[c] => 1.0 Phosphatidylethanolamine (didodecanoyl, n-C12:0)[c] + 1.0 CO2 CO2[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links

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