Difference between revisions of "2mahmp"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/AGPR AGPR] == * direction: ** REVERSIBLE * common name: ** N-acetyl-g-glutamyl-phosphate reductase...") |
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/CYTD CYTD] == * direction: ** LEFT-TO-RIGHT * common name: ** Cytidine deaminase * Synonym(s): ==...") |
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[[Category:Reaction]] | [[Category:Reaction]] | ||
− | == Reaction [http://bigg.ucsd.edu/universal/reactions/ | + | == Reaction [http://bigg.ucsd.edu/universal/reactions/CYTD CYTD] == |
* direction: | * direction: | ||
− | ** | + | ** LEFT-TO-RIGHT |
* common name: | * common name: | ||
− | ** | + | ** Cytidine deaminase |
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
− | ** 1.0 [[ | + | ** 1.0 [[h]][c] '''+''' 1.0 [[h2o]][c] '''+''' 1.0 [[cytd]][c] '''=>''' 1.0 [[nh4]][c] '''+''' 1.0 [[uri]][c] |
* With common name(s): | * With common name(s): | ||
− | ** 1.0 | + | ** 1.0 H+[c] '''+''' 1.0 H2O H2O[c] '''+''' 1.0 Cytidine[c] '''=>''' 1.0 Ammonium[c] '''+''' 1.0 Uridine[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
− | * [[ | + | * [[B471_RS0118750]] |
** [[pantograph]]-[[cljungdahlii]] | ** [[pantograph]]-[[cljungdahlii]] | ||
** [[pantograph]]-[[bsubtilis]] | ** [[pantograph]]-[[bsubtilis]] | ||
− | |||
== Pathways == | == Pathways == | ||
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100] | * [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100] | ||
− | ** ''' | + | ** '''471''' reactions found over '''2349''' reactions in the full pathway |
− | * [[ | + | * [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240] |
− | ** ''' | + | ** '''68''' reactions found over '''244''' reactions in the full pathway |
− | * [[ | + | * [[map00983]]: [http://www.genome.jp/dbget-bin/www_bget?map00983 map00983] |
− | ** ''' | + | ** '''22''' reactions found over '''72''' reactions in the full pathway |
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
− | + | ||
== Reconstruction information == | == Reconstruction information == | ||
− | * [[orthology]] | + | * Category: [[orthology]] |
− | ** [[ | + | ** Source: [[orthology-cljungdahlii]] |
− | *** [[ | + | *** Tool: [[pantograph]] |
− | ** | + | ** Source: [[orthology-bsubtilis]] |
− | *** [[ | + | *** Tool: [[pantograph]] |
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
− | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16069 16069] |
− | * | + | * EC Number : 3.5.4.5 |
− | * MetaNetX (MNX) Equation : | + | * MetaNetX (MNX) Equation : MNXR97039 |
− | * KEGG Reaction : | + | * KEGG Reaction : R01878 |
− | * | + | * BioCyc : META:CYTIDEAM2-RXN |
− | {{#set: direction= | + | {{#set: direction=LEFT-TO-RIGHT}} |
− | {{#set: common name= | + | {{#set: common name=Cytidine deaminase}} |
− | {{#set: gene associated= | + | {{#set: gene associated=B471_RS0118750}} |
− | {{#set: in pathway=map01100| | + | {{#set: in pathway=map01100|map00240|map00983}} |
{{#set: reconstruction category=orthology}} | {{#set: reconstruction category=orthology}} | ||
+ | {{#set: reconstruction source=orthology-cljungdahlii|orthology-bsubtilis}} | ||
{{#set: reconstruction tool=pantograph}} | {{#set: reconstruction tool=pantograph}} | ||
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Revision as of 23:37, 20 March 2018
Contents
Reaction CYTD
- direction:
- LEFT-TO-RIGHT
- common name:
- Cytidine deaminase
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1.0 H+[c] + 1.0 H2O H2O[c] + 1.0 Cytidine[c] => 1.0 Ammonium[c] + 1.0 Uridine[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
Pathways
- map01100: map01100
- 471 reactions found over 2349 reactions in the full pathway
- map00240: map00240
- 68 reactions found over 244 reactions in the full pathway
- map00983: map00983
- 22 reactions found over 72 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-cljungdahlii
- Tool: pantograph
- Source: orthology-bsubtilis
- Tool: pantograph
- Source: orthology-cljungdahlii
External links
- RHEA:
- EC Number : 3.5.4.5
- MetaNetX (MNX) Equation : MNXR97039
- KEGG Reaction : R01878
- BioCyc : META:CYTIDEAM2-RXN