Difference between revisions of "Dann"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/GMPS2 GMPS2] == * direction: ** LEFT-TO-RIGHT * common name: ** GMP synthase * Synonym(s): == Reac...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/CU2t CU2t] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With identifier...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://bigg.ucsd.edu/universal/reactions/GMPS2 GMPS2] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/CU2t CU2t] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** GMP synthase
 
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[xmp]][c] '''+''' 1.0 [[atp]][c] '''+''' 1.0 [[gln__L]][c] '''+''' 1.0 [[h2o]][c] '''=>''' 1.0 [[amp]][c] '''+''' 1.0 [[glu__L]][c] '''+''' 1.0 [[gmp]][c] '''+''' 2.0 [[h]][c] '''+''' 1.0 [[ppi]][c]
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** 1.0 [[cu2]][e] '''=>''' 1.0 [[cu2]][c]
 
* With common name(s):
 
* With common name(s):
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** 1.0 Xanthosine 5'-phosphate[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 L-Glutamine[c] '''+''' 1.0 H2O H2O[c] '''=>''' 1.0 AMP C10H12N5O7P[c] '''+''' 1.0 L-Glutamate[c] '''+''' 1.0 GMP C10H12N5O8P[c] '''+''' 2.0 H+[c] '''+''' 1.0 Diphosphate[c]
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** 1.0 Copper[e] '''=>''' 1.0 Copper[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[B471_RS0105290]]
 
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** [[pantograph]]-[[cljungdahlii]]
 
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** [[pantograph]]-[[bsubtilis]]
 
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** [[pantograph]]-[[aferrooxidans]]
 
 
== Pathways  ==
 
== Pathways  ==
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* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
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** '''472''' reactions found over '''2349''' reactions in the full pathway
 
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* [[map00983]]: [http://www.genome.jp/dbget-bin/www_bget?map00983 map00983]
 
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** '''22''' reactions found over '''72''' reactions in the full pathway
 
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* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
 
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** '''64''' reactions found over '''298''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
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* Category: [[manual]]
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** [[pantograph]]:
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** Source: [[manual-missing_rxn_creator]]
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*** [[aferrooxidans]]
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*** Comment: [[reaction from orthology templates not found by pantograph]]
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*** [[cljungdahlii]]
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−
*** [[bsubtilis]]
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== External links  ==
 
== External links  ==
−
* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11680 11680]
 
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* BioCyc : META:GMP-SYN-GLUT-RXN
 
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* MetaNetX (MNX) Equation : MNXR100384
 
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* KEGG Reaction : R01231
 
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* EC Number : 6.3.5.2
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=GMP synthase}}
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{{#set: in pathway=}}
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{{#set: gene associated=B471_RS0105290}}
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{{#set: reconstruction category=manual}}
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{{#set: in pathway=map01100|map00983|map00230}}
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{{#set: reconstruction source=manual-missing_rxn_creator}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction comment=reaction from orthology templates not found by pantograph}}
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{{#set: reconstruction tool=pantograph}}
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−
{{#set: reconstruction source=aferrooxidans|cljungdahlii|bsubtilis}}
+

Revision as of 00:37, 21 March 2018

Reaction CU2t

  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Copper[e] => 1.0 Copper[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links

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