Difference between revisions of "Dtpcudcpp"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/UPPDC1 UPPDC1] == * direction: ** LEFT-TO-RIGHT * common name: ** Uroporphyrinogen decarboxylase (u...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/MNabc MNabc] == * direction: ** LEFT-TO-RIGHT * common name: ** Manganese transport via ABC system...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://bigg.ucsd.edu/universal/reactions/UPPDC1 UPPDC1] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/MNabc MNabc] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Uroporphyrinogen decarboxylase (uroporphyrinogen III)
+
** Manganese transport via ABC system
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[uppg3]][c] '''+''' 4.0 [[h]][c] '''=>''' 1.0 [[cpppg3]][c] '''+''' 4.0 [[co2]][c]
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** 1.0 [[mn2]][e] '''+''' 1.0 [[atp]][c] '''+''' 1.0 [[h2o]][c] '''=>''' 1.0 [[mn2]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[adp]][c] '''+''' 1.0 [[pi]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 Uroporphyrinogen III[c] '''+''' 4.0 H+[c] '''=>''' 1.0 Coproporphyrinogen III[c] '''+''' 4.0 CO2 CO2[c]
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** 1.0 Manganese[e] '''+''' 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 H2O H2O[c] '''=>''' 1.0 Manganese[c] '''+''' 1.0 H+[c] '''+''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 Phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[B471_RS0117740]]
 
−
** [[pantograph]]-[[bsubtilis]]
 
−
** [[pantograph]]-[[aferrooxidans]]
 
 
== Pathways  ==
 
== Pathways  ==
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* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
−
** '''472''' reactions found over '''2349''' reactions in the full pathway
 
−
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 
−
** '''212''' reactions found over '''1054''' reactions in the full pathway
 
−
* [[map00860]]: [http://www.genome.jp/dbget-bin/www_bget?map00860 map00860]
 
−
** '''23''' reactions found over '''106''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[manual]]
−
** [[pantograph]]:
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** Source: [[manual-reaction_to_add_delete]]
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*** [[aferrooxidans]]
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*** Comment: [[reaction added from literature evidence or biological expertise]]
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*** [[bsubtilis]]
+
 
== External links  ==
 
== External links  ==
−
* EC Number : 4.1.1.37
 
−
* BioCyc : META:UROGENDECARBOX-RXN
 
−
* MetaNetX (MNX) Equation : MNXR105140
 
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19865 19865]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17365#1 17365#1]
−
* Reactome : REACT_R-ATH-189425
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* MetaNetX (MNX) Equation : MNXR101680
−
* KEGG Reaction : R03197
+
* EC Number : 3.6.3.35
 +
* BioCyc : META:3.6.3.35-RXN
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Uroporphyrinogen decarboxylase (uroporphyrinogen III)}}
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{{#set: common name=Manganese transport via ABC system}}
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{{#set: gene associated=B471_RS0117740}}
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{{#set: in pathway=}}
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{{#set: in pathway=map01100|map01110|map00860}}
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{{#set: reconstruction category=manual}}
−
{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=manual-reaction_to_add_delete}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction comment=reaction added from literature evidence or biological expertise}}
−
{{#set: reconstruction source=aferrooxidans|bsubtilis}}
+

Revision as of 00:38, 21 March 2018

Reaction MNabc

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Manganese transport via ABC system
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Manganese[e] + 1.0 ATP C10H12N5O13P3[c] + 1.0 H2O H2O[c] => 1.0 Manganese[c] + 1.0 H+[c] + 1.0 ADP C10H12N5O10P2[c] + 1.0 Phosphate[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links

  • RHEA:
  • MetaNetX (MNX) Equation : MNXR101680
  • EC Number : 3.6.3.35
  • BioCyc : META:3.6.3.35-RXN




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