Difference between revisions of "Agm"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ACONTb ACONTb] == * direction: ** REVERSIBLE * common name: ** Aconitase (half-reaction B, Isocitra...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/AMMQLT8 AMMQLT8] == * direction: ** LEFT-TO-RIGHT * common name: ** S-adenosylmethione:2-demthylmen...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/ACONTb ACONTb] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/AMMQLT8 AMMQLT8] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Aconitase (half-reaction B, Isocitrate hydro-lyase)
+
** S-adenosylmethione:2-demthylmenaquinole methyltransferase (menaquinone 8)
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[h2o]][c] '''+''' 1.0 [[acon_C]][c] '''<=>''' 1.0 [[icit]][c]
+
** 1.0 [[2dmmql8]][c] '''+''' 1.0 [[amet]][c] '''=>''' 1.0 [[mql8]][c] '''+''' 1.0 [[ahcys]][c] '''+''' 1.0 [[h]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 H2O H2O[c] '''+''' 1.0 Cis-Aconitate[c] '''<=>''' 1.0 Isocitrate[c]
+
** 1.0 2-Demethylmenaquinol 8[c] '''+''' 1.0 S-Adenosyl-L-methionine[c] '''=>''' 1.0 Menaquinol 8[c] '''+''' 1.0 S-Adenosyl-L-homocysteine[c] '''+''' 1.0 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[B471_RS0105965]]
+
* [[B471_RS24450]]
 
** [[pantograph]]-[[cljungdahlii]]
 
** [[pantograph]]-[[cljungdahlii]]
−
** [[pantograph]]-[[aferrooxidans]]
 
 
== Pathways  ==
 
== Pathways  ==
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
−
** '''472''' reactions found over '''2349''' reactions in the full pathway
+
** '''471''' reactions found over '''2349''' reactions in the full pathway
−
* [[map00630]]: [http://www.genome.jp/dbget-bin/www_bget?map00630 map00630]
+
* [[map00130]]: [http://www.genome.jp/dbget-bin/www_bget?map00130 map00130]
−
** '''23''' reactions found over '''129''' reactions in the full pathway
+
** '''6''' reactions found over '''40''' reactions in the full pathway
 
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 
** '''212''' reactions found over '''1054''' reactions in the full pathway
 
** '''212''' reactions found over '''1054''' reactions in the full pathway
−
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
 
−
** '''101''' reactions found over '''715''' reactions in the full pathway
 
−
* [[map01210]]: [http://www.genome.jp/dbget-bin/www_bget?map01210 map01210]
 
−
** '''26''' reactions found over '''80''' reactions in the full pathway
 
−
* [[map00720]]: [http://www.genome.jp/dbget-bin/www_bget?map00720 map00720]
 
−
** '''25''' reactions found over '''157''' reactions in the full pathway
 
−
* [[map00020]]: [http://www.genome.jp/dbget-bin/www_bget?map00020 map00020]
 
−
** '''10''' reactions found over '''70''' reactions in the full pathway
 
−
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 
−
** '''148''' reactions found over '''694''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-cljungdahlii]]
−
*** [[aferrooxidans]]
+
*** Tool: [[pantograph]]
−
*** [[cljungdahlii]]
+
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22144 22144]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30063 30063]
−
* MetaNetX (MNX) Equation : MNXR95387
+
* MetaNetX (MNX) Equation : MNXR95819
−
* KEGG Reaction : R01900
+
* EC Number : 2.1.1.163
−
* EC Number : 4.2.1.3
+
* BioCyc : META:ADOMET-DMK-METHYLTRANSFER-RXN
−
{{#set: direction=REVERSIBLE}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Aconitase (half-reaction B, Isocitrate hydro-lyase)}}
+
{{#set: common name=S-adenosylmethione:2-demthylmenaquinole methyltransferase (menaquinone 8)}}
−
{{#set: gene associated=B471_RS0105965}}
+
{{#set: gene associated=B471_RS24450}}
−
{{#set: in pathway=map01100|map00630|map01110|map01120|map01210|map00720|map00020|map01130}}
+
{{#set: in pathway=map01100|map00130|map01110}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-cljungdahlii}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=aferrooxidans|cljungdahlii}}
 

Revision as of 23:38, 20 March 2018

Reaction AMMQLT8

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • S-adenosylmethione:2-demthylmenaquinole methyltransferase (menaquinone 8)
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 2-Demethylmenaquinol 8[c] + 1.0 S-Adenosyl-L-methionine[c] => 1.0 Menaquinol 8[c] + 1.0 S-Adenosyl-L-homocysteine[c] + 1.0 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • MetaNetX (MNX) Equation : MNXR95819
  • EC Number : 2.1.1.163
  • BioCyc : META:ADOMET-DMK-METHYLTRANSFER-RXN




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