Difference between revisions of "3hdcoa"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/CPC2MT CPC2MT] == * direction: ** LEFT-TO-RIGHT * common name: ** Precorrin-2 C20-methyltransferase...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/NDPK5 NDPK5] == * direction: ** REVERSIBLE * common name: ** Nucleoside-diphosphate kinase (ATP:dGD...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/CPC2MT CPC2MT] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/NDPK5 NDPK5] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** Precorrin-2 C20-methyltransferase
+
** Nucleoside-diphosphate kinase (ATP:dGDP)
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[amet]][c] '''+''' 1.0 [[copre2]][c] '''=>''' 1.0 [[h]][c] '''+''' 1.0 [[ahcys]][c] '''+''' 1.0 [[copre3]][c]
+
** 1.0 [[atp]][c] '''+''' 1.0 [[dgdp]][c] '''<=>''' 1.0 [[adp]][c] '''+''' 1.0 [[dgtp]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 S-Adenosyl-L-methionine[c] '''+''' 1.0 Cobalt-precorrin-2[c] '''=>''' 1.0 H+[c] '''+''' 1.0 S-Adenosyl-L-homocysteine[c] '''+''' 1.0 Cobalt-precorrin 3[c]
+
** 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 DGDP C10H12N5O10P2[c] '''<=>''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 DGTP C10H12N5O13P3[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[B471_RS0100900]]
 +
** [[pantograph]]-[[bsubtilis]]
 +
** [[pantograph]]-[[aferrooxidans]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
 +
** '''68''' reactions found over '''244''' reactions in the full pathway
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
−
** '''472''' reactions found over '''2349''' reactions in the full pathway
+
** '''471''' reactions found over '''2349''' reactions in the full pathway
−
* [[map00860]]: [http://www.genome.jp/dbget-bin/www_bget?map00860 map00860]
+
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
−
** '''23''' reactions found over '''106''' reactions in the full pathway
+
** '''212''' reactions found over '''1054''' reactions in the full pathway
 +
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
 +
** '''64''' reactions found over '''298''' reactions in the full pathway
 +
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 +
** '''148''' reactions found over '''694''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[manual]]:
+
* Category: [[orthology]]
−
** [[reaction added from literature evidence or biological expertise]]
+
** Source: [[orthology-bsubtilis]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-aferrooxidans]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17997 17997]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27690 27690]
−
* MetaNetX (MNX) Equation : MNXR96832
+
* EC Number : 2.7.4.6
−
* EC Number : 2.1.1.151
+
* MetaNetX (MNX) Equation : MNXR96118
−
* BioCyc : META:RXN-8760
+
* KEGG Reaction : R01857
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* BioCyc : META:DGDPKIN-RXN
−
{{#set: common name=Precorrin-2 C20-methyltransferase}}
+
{{#set: direction=REVERSIBLE}}
−
{{#set: in pathway=map01100|map00860}}
+
{{#set: common name=Nucleoside-diphosphate kinase (ATP:dGDP)}}
−
{{#set: reconstruction category=manual}}
+
{{#set: gene associated=B471_RS0100900}}
−
{{#set: reconstruction source=reaction added from literature evidence or biological expertise}}
+
{{#set: in pathway=map00240|map01100|map01110|map00230|map01130}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-bsubtilis|orthology-aferrooxidans}}
 +
{{#set: reconstruction tool=pantograph}}

Revision as of 23:40, 20 March 2018

Reaction NDPK5

  • direction:
    • REVERSIBLE
  • common name:
    • Nucleoside-diphosphate kinase (ATP:dGDP)
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 ATP C10H12N5O13P3[c] + 1.0 DGDP C10H12N5O10P2[c] <=> 1.0 ADP C10H12N5O10P2[c] + 1.0 DGTP C10H12N5O13P3[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • EC Number : 2.7.4.6
  • MetaNetX (MNX) Equation : MNXR96118
  • KEGG Reaction : R01857
  • BioCyc : META:DGDPKIN-RXN




Retrieved from "http://gem-aureme.irisa.fr/cutigem/index.php?title=3hdcoa&oldid=4014"