Difference between revisions of "Ibcoa"

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(Created page with "Category:Metabolite == Metabolite [http://bigg.ucsd.edu/universal/metabolites/nadp nadp] == * common name: ** Nicotinamide adenine dinucleotide phosphate * Synonym(s): ==...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/SERAT SERAT] == * direction: ** REVERSIBLE * common name: ** Serine O-acetyltransferase * Synonym(s...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://bigg.ucsd.edu/universal/metabolites/nadp nadp] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/SERAT SERAT] ==
 +
* direction:
 +
** REVERSIBLE
 
* common name:
 
* common name:
−
** Nicotinamide adenine dinucleotide phosphate
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** Serine O-acetyltransferase
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[NADPPPS]]
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* With identifiers:
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* [[BIOMASS]]
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** 1.0 [[accoa]][c] '''+''' 1.0 [[ser__L]][c] '''<=>''' 1.0 [[coa]][c] '''+''' 1.0 [[acser]][c]
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* [[GND]]
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* With common name(s):
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* [[ME2]]
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** 1.0 Acetyl-CoA[c] '''+''' 1.0 L-Serine[c] '''<=>''' 1.0 Coenzyme A[c] '''+''' 1.0 O-Acetyl-L-serine[c]
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== Reaction(s) known to produce the compound ==
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* [[NADK]]
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== Genes associated with this reaction  ==
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* [[DPR]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[DXPRIi]]
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* [[B471_RS0118445]]
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* [[MTHFR3]]
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** [[pantograph]]-[[cljungdahlii]]
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* [[G5SD]]
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** [[pantograph]]-[[bsubtilis]]
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* [[EAR141y]]
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** [[pantograph]]-[[aferrooxidans]]
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* [[FMNRx2]]
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== Pathways  ==
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* [[DHDPRy]]
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* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
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* [[PIMS]]
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** '''471''' reactions found over '''2349''' reactions in the full pathway
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* [[GLUSy]]
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* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
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* [[APRAUR]]
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** '''212''' reactions found over '''1054''' reactions in the full pathway
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* [[EAR161y]]
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* [[map00920]]: [http://www.genome.jp/dbget-bin/www_bget?map00920 map00920]
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* [[UAPGR]]
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** '''5''' reactions found over '''56''' reactions in the full pathway
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* [[P5CR]]
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* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
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* [[3OAR161]]
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** '''101''' reactions found over '''715''' reactions in the full pathway
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* [[NADK1]]
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* [[map00270]]: [http://www.genome.jp/dbget-bin/www_bget?map00270 map00270]
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* [[NADK3]]
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** '''24''' reactions found over '''135''' reactions in the full pathway
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* [[NADK2]]
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* [[map01200]]: [http://www.genome.jp/dbget-bin/www_bget?map01200 map01200]
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* [[GLUTRR]]
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** '''51''' reactions found over '''220''' reactions in the full pathway
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* [[NADK4]]
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* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
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* [[3OAR181]]
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** '''78''' reactions found over '''228''' reactions in the full pathway
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* [[3OAR121]]
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* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
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* [[5HBZIDMT]]
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** '''148''' reactions found over '''694''' reactions in the full pathway
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* [[CPPPGOAN2_CUT]]
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== Reconstruction information  ==
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* [[EAR181y]]
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* Category: [[orthology]]
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* [[GAPDi_nadp]]
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** Source: [[orthology-cljungdahlii]]
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* [[3OAR141]]
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*** Tool: [[pantograph]]
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* [[EAR40y]]
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** Source: [[orthology-bsubtilis]]
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* [[TDPDRR]]
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*** Tool: [[pantograph]]
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* [[AMMQT7]]
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** Source: [[orthology-aferrooxidans]]
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* [[CPC6R]]
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*** Tool: [[pantograph]]
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* [[EAR180y]]
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−
* [[NADK5]]
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−
* [[TRDR]]
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* [[EAR121y]]
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* [[THZPSN_CUT]]
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−
* [[FOLR2]]
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== Reaction(s) of unknown directionality ==
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−
* [[AGPR]]
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* [[3OAR60]]
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* [[EAR80y_CUT]]
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−
* [[DHFR]]
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* [[EAR140y_CUT]]
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−
* [[3OAR80]]
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−
* [[ASAD]]
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* [[EAR60y_CUT]]
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−
* [[3OAR40]]
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* [[GLUDy]]
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−
* [[SHK3Dr]]
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−
* [[EAR100y_CUT]]
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−
* [[KARA1]]
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−
* [[KARA2]]
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* [[FRNDPR2r_CUT]]
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−
* [[ALCD2y]]
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* [[EAR120y_CUT]]
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* [[ARABRr]]
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−
* [[3OAR160]]
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* [[3OAR120]]
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* [[ICDHyr]]
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* [[3OAR100]]
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−
* [[3OAR140]]
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−
* [[G3PD2]]
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−
* [[HSDy]]
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−
* [[MTHFD]]
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−
* [[DURAD]]
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−
* [[SULR_CUT]]
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−
* [[G6PDH2r]]
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−
* [[EAR160y_CUT]]
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−
* [[3OAR180]]
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== External links  ==
 
== External links  ==
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{{#set: common name=Nicotinamide adenine dinucleotide phosphate}}
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* EC Number : 2.3.1.30
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{{#set: consumed by=NADPPPS|BIOMASS|GND|ME2}}
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* BioCyc : META:SERINE-O-ACETTRAN-RXN
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{{#set: produced by=NADK|DPR|DXPRIi|MTHFR3|G5SD|EAR141y|FMNRx2|DHDPRy|PIMS|GLUSy|APRAUR|EAR161y|UAPGR|P5CR|3OAR161|NADK1|NADK3|NADK2|GLUTRR|NADK4|3OAR181|3OAR121|5HBZIDMT|CPPPGOAN2_CUT|EAR181y|GAPDi_nadp|3OAR141|EAR40y|TDPDRR|AMMQT7|CPC6R|EAR180y|NADK5|TRDR|EAR121y|THZPSN_CUT|FOLR2}}
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* MetaNetX (MNX) Equation : MNXR104275
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{{#set: consumed or produced by=AGPR|3OAR60|EAR80y_CUT|DHFR|EAR140y_CUT|3OAR80|ASAD|EAR60y_CUT|3OAR40|GLUDy|SHK3Dr|EAR100y_CUT|KARA1|KARA2|FRNDPR2r_CUT|ALCD2y|EAR120y_CUT|ARABRr|3OAR160|3OAR120|ICDHyr|3OAR100|3OAR140|G3PD2|HSDy|MTHFD|DURAD|SULR_CUT|G6PDH2r|EAR160y_CUT|3OAR180}}
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* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24560 24560]
 +
* Reactome : REACT_R-MTU-936615
 +
* KEGG Reaction : R00586
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=Serine O-acetyltransferase}}
 +
{{#set: gene associated=B471_RS0118445}}
 +
{{#set: in pathway=map01100|map01110|map00920|map01120|map00270|map01200|map01230|map01130}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-cljungdahlii|orthology-bsubtilis|orthology-aferrooxidans}}
 +
{{#set: reconstruction tool=pantograph}}

Revision as of 00:40, 21 March 2018

Reaction SERAT

  • direction:
    • REVERSIBLE
  • common name:
    • Serine O-acetyltransferase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Acetyl-CoA[c] + 1.0 L-Serine[c] <=> 1.0 Coenzyme A[c] + 1.0 O-Acetyl-L-serine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • EC Number : 2.3.1.30
  • BioCyc : META:SERINE-O-ACETTRAN-RXN
  • MetaNetX (MNX) Equation : MNXR104275
  • RHEA:
  • Reactome : REACT_R-MTU-936615
  • KEGG Reaction : R00586




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