Difference between revisions of "12dag3p BS"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/MALt2r_CUT MALt2r_CUT] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * Wit...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/INS2D INS2D] == * direction: ** LEFT-TO-RIGHT * common name: ** Inositol 2-dehydrogenase * Synonym(...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/MALt2r_CUT MALt2r_CUT] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/INS2D INS2D] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** Inositol 2-dehydrogenase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[mal__L]][e] '''+''' 1.0 [[h]][e] '''=>''' 1.0 [[mal__L]][c] '''+''' 1.0 [[h]][c]
+
** 1.0 [[nad]][c] '''+''' 1.0 [[inost]][c] '''=>''' 1.0 [[nadh]][c] '''+''' 1.0 [[2ins]][c] '''+''' 1.0 [[h]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 L-Malate[e] '''+''' 1.0 H+[e] '''=>''' 1.0 L-Malate[c] '''+''' 1.0 H+[c]
+
** 1.0 Nicotinamide adenine dinucleotide[c] '''+''' 1.0 Myo-Inositol[c] '''=>''' 1.0 Nicotinamide adenine dinucleotide - reduced[c] '''+''' 1.0 2-Inosose[c] '''+''' 1.0 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[B471_RS23035]]
+
* [[B471_RS0106500]]
** MANUAL
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** [[pantograph]]-[[bsubtilis]]
 +
* [[B471_RS0102405]]
 +
** [[pantograph]]-[[bsubtilis]]
 +
* [[B471_RS0114265]]
 +
** [[pantograph]]-[[bsubtilis]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 +
** '''471''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 +
** '''148''' reactions found over '''694''' reactions in the full pathway
 +
* [[map00521]]: [http://www.genome.jp/dbget-bin/www_bget?map00521 map00521]
 +
** '''8''' reactions found over '''14''' reactions in the full pathway
 +
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
 +
** '''101''' reactions found over '''715''' reactions in the full pathway
 +
* [[map00562]]: [http://www.genome.jp/dbget-bin/www_bget?map00562 map00562]
 +
** '''3''' reactions found over '''21''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[manual]]:
+
* Category: [[orthology]]
** [[reaction found from orthology but we fixed reversibility based on biological expertise]]
+
** Source: [[orthology-bsubtilis]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16949 16949]
 +
* EC Number : 1.1.1.18
 +
* MetaNetX (MNX) Equation : MNXR100842
 +
* KEGG Reaction : R01183
 +
* BioCyc : META:MYO-INOSITOL-2-DEHYDROGENASE-RXN
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: gene associated=B471_RS23035}}
+
{{#set: common name=Inositol 2-dehydrogenase}}
{{#set: in pathway=}}
+
{{#set: gene associated=B471_RS0106500|B471_RS0102405|B471_RS0114265}}
{{#set: reconstruction category=manual}}
+
{{#set: in pathway=map01100|map01130|map00521|map01120|map00562}}
{{#set: reconstruction source=reaction found from orthology but we fixed reversibility based on biological expertise}}
+
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-bsubtilis}}
 +
{{#set: reconstruction tool=pantograph}}

Revision as of 23:41, 20 March 2018

Reaction INS2D

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Inositol 2-dehydrogenase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Nicotinamide adenine dinucleotide[c] + 1.0 Myo-Inositol[c] => 1.0 Nicotinamide adenine dinucleotide - reduced[c] + 1.0 2-Inosose[c] + 1.0 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • EC Number : 1.1.1.18
  • MetaNetX (MNX) Equation : MNXR100842
  • KEGG Reaction : R01183
  • BioCyc : META:MYO-INOSITOL-2-DEHYDROGENASE-RXN