Difference between revisions of "EX pi"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/RNDR1 RNDR1] == * direction: ** LEFT-TO-RIGHT * common name: ** Ribonucleoside-diphosphate reductas...") |
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/MDDCP4ex MDDCP4ex] == * direction: ** LEFT-TO-RIGHT * common name: ** Murein D,D-carboxypeptidase (...") |
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[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://bigg.ucsd.edu/universal/reactions/ | + | == Reaction [http://bigg.ucsd.edu/universal/reactions/MDDCP4ex MDDCP4ex] == |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
* common name: | * common name: | ||
| − | ** | + | ** Murein D,D-carboxypeptidase (murein5p4p) (periplasm) |
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1.0 [[ | + | ** 1.0 [[murein5p4p]][e] '''+''' 1.0 [[h2o]][e] '''=>''' 1.0 [[ala__D]][e] '''+''' 1.0 [[murein4p4p]][e] |
* With common name(s): | * With common name(s): | ||
| − | ** 1.0 | + | ** 1.0 Two linked disacharide pentapeptide and tetrapeptide murein units (uncrosslinked, middle of chain)[e] '''+''' 1.0 H2O H2O[e] '''=>''' 1.0 D-Alanine[e] '''+''' 1.0 Two linked disacharide tetrapeptide murein units (uncrosslinked, middle of chain)[e] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * [[ | + | * [[B471_RS0101180]] |
** [[pantograph]]-[[cljungdahlii]] | ** [[pantograph]]-[[cljungdahlii]] | ||
== Pathways == | == Pathways == | ||
| − | * [[ | + | * [[map00550]]: [http://www.genome.jp/dbget-bin/www_bget?map00550 map00550] |
| − | ** ''' | + | ** '''14''' reactions found over '''27''' reactions in the full pathway |
| − | + | ||
| − | + | ||
| − | + | ||
| − | + | ||
| − | + | ||
| − | + | ||
== Reconstruction information == | == Reconstruction information == | ||
| − | * [[orthology]] | + | * Category: [[orthology]] |
| − | ** [[ | + | ** Source: [[orthology-cljungdahlii]] |
| − | *** [[ | + | *** Tool: [[pantograph]] |
== External links == | == External links == | ||
| − | + | * MetaNetX (MNX) Equation : MNXR101432 | |
| − | * MetaNetX (MNX) Equation : | + | * EC Number : 3.4.16.4 |
| − | + | ||
| − | * EC Number : | + | |
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | {{#set: common name= | + | {{#set: common name=Murein D,D-carboxypeptidase (murein5p4p) (periplasm)}} |
| − | {{#set: gene associated= | + | {{#set: gene associated=B471_RS0101180}} |
| − | {{#set: in pathway= | + | {{#set: in pathway=map00550}} |
{{#set: reconstruction category=orthology}} | {{#set: reconstruction category=orthology}} | ||
| + | {{#set: reconstruction source=orthology-cljungdahlii}} | ||
{{#set: reconstruction tool=pantograph}} | {{#set: reconstruction tool=pantograph}} | ||
| − | |||
Revision as of 00:42, 21 March 2018
Contents
Reaction MDDCP4ex
- direction:
- LEFT-TO-RIGHT
- common name:
- Murein D,D-carboxypeptidase (murein5p4p) (periplasm)
- Synonym(s):
Reaction Formula
- With identifiers:
- 1.0 murein5p4p[e] + 1.0 h2o[e] => 1.0 ala__D[e] + 1.0 murein4p4p[e]
- With common name(s):
- 1.0 Two linked disacharide pentapeptide and tetrapeptide murein units (uncrosslinked, middle of chain)[e] + 1.0 H2O H2O[e] => 1.0 D-Alanine[e] + 1.0 Two linked disacharide tetrapeptide murein units (uncrosslinked, middle of chain)[e]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
Pathways
Reconstruction information
- Category: orthology
- Source: orthology-cljungdahlii
- Tool: pantograph
- Source: orthology-cljungdahlii
External links
- MetaNetX (MNX) Equation : MNXR101432
- EC Number : 3.4.16.4
