Difference between revisions of "PGSA140"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/SUCBZS SUCBZS] == * direction: ** LEFT-TO-RIGHT * common name: ** O-succinylbenzoate-CoA synthase *...")
 
(Created page with "Category:Pathway == Pathway [http://www.genome.jp/dbget-bin/www_bget?map00521 map00521] == * common_name: ** Streptomycin biosynthesis * Synonym(s): == Reaction(s) found...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://bigg.ucsd.edu/universal/reactions/SUCBZS SUCBZS] ==
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== Pathway [http://www.genome.jp/dbget-bin/www_bget?map00521 map00521] ==
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* direction:
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* common_name:
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** LEFT-TO-RIGHT
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** Streptomycin biosynthesis
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* common name:
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** O-succinylbenzoate-CoA synthase
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''8''' reactions found over '''14''' reactions in the full pathway
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** 1.0 [[2shchc]][c] '''=>''' 1.0 [[sucbz]][c] '''+''' 1.0 [[h2o]][c]
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* [[G1PTT]]
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* With common name(s):
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** 1 associated gene(s):
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** 1.0 2-Succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate[c] '''=>''' 1.0 O-Succinylbenzoate[c] '''+''' 1.0 H2O H2O[c]
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*** [[B471_RS0104485]]
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** 1 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[orthology-cljungdahlii]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[HEX1]]
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* [[B471_RS0119380]]
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** 1 associated gene(s):
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** [[pantograph]]-[[bsubtilis]]
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*** [[B471_RS0108295]]
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== Pathways  ==
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** 2 reconstruction source(s) associated:
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* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
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*** [[orthology-cljungdahlii]]
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** '''472''' reactions found over '''2349''' reactions in the full pathway
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*** [[orthology-bsubtilis]]
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* [[map00130]]: [http://www.genome.jp/dbget-bin/www_bget?map00130 map00130]
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* [[INS2D]]
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** '''6''' reactions found over '''40''' reactions in the full pathway
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** 3 associated gene(s):
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* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
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*** [[B471_RS0106500]]
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** '''212''' reactions found over '''1054''' reactions in the full pathway
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*** [[B471_RS0102405]]
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== Reconstruction information  ==
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*** [[B471_RS0114265]]
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* [[orthology]]:
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** 1 reconstruction source(s) associated:
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** [[pantograph]]:
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*** [[orthology-bsubtilis]]
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*** [[bsubtilis]]
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* [[MI1PP]]
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** 1 associated gene(s):
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*** [[B471_RS0101420]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-bsubtilis]]
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* [[PGMT]]
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** 2 associated gene(s):
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*** [[B471_RS0105610]]
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*** [[B471_RS0119315]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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*** [[orthology-bsubtilis]]
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* [[TDPDRE]]
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** 1 associated gene(s):
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*** [[B471_RS0104490]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-aferrooxidans]]
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* [[TDPDRR]]
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** 1 associated gene(s):
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*** [[B471_RS0114510]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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*** [[orthology-aferrooxidans]]
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* [[TDPGDH]]
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** 1 associated gene(s):
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*** [[B471_RS0104495]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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*** [[orthology-aferrooxidans]]
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== Reaction(s) not found ==
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* [http://bigg.ucsd.edu/universal/reactions/GLUKA GLUKA]
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* [http://bigg.ucsd.edu/universal/reactions/GLUKAh GLUKAh]
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* [http://bigg.ucsd.edu/universal/reactions/MI1PS MI1PS]
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* [http://bigg.ucsd.edu/universal/reactions/MI3PP MI3PP]
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* [http://bigg.ucsd.edu/universal/reactions/MI3PSB MI3PSB]
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* [http://bigg.ucsd.edu/universal/reactions/MI4PP MI4PP]
 
== External links  ==
 
== External links  ==
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* MetaNetX (MNX) Equation : MNXR104613
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{{#set: common_name=Streptomycin biosynthesis}}
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* EC Number : 4.2.1
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{{#set: reaction found=8}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: total reaction=14}}
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{{#set: common name=O-succinylbenzoate-CoA synthase}}
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{{#set: completion rate=57.0}}
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{{#set: gene associated=B471_RS0119380}}
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{{#set: in pathway=map01100|map00130|map01110}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=bsubtilis}}
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Revision as of 23:49, 20 March 2018

Pathway map00521

  • common_name:
    • Streptomycin biosynthesis
  • Synonym(s):

Reaction(s) found

8 reactions found over 14 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/cutigem/index.php?title=PGSA140&oldid=4360"