Difference between revisions of "OMCDC"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene B471_RS23765 == * Synonym(s): == Reactions associated == * RPE ** pantograph-cljungdahlii ** pantograph-bsubtilis ** pantograp...")
 
(Created page with "Category:Pathway == Pathway [http://www.genome.jp/dbget-bin/www_bget?map00030 map00030] == * common_name: ** Pentose phosphate pathway * Synonym(s): == Reaction(s) found...")
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Pathway]]
−
== Gene B471_RS23765 ==
+
== Pathway [http://www.genome.jp/dbget-bin/www_bget?map00030 map00030] ==
 +
* common_name:
 +
** Pentose phosphate pathway
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reactions associated ==
+
== Reaction(s) found ==
 +
'''20''' reactions found over '''69''' reactions in the full pathway
 +
* [[DRPA]]
 +
** 1 associated gene(s):
 +
*** [[B471_RS0113280]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[orthology-cljungdahlii]]
 +
*** [[orthology-bsubtilis]]
 +
* [[EDA]]
 +
** 1 associated gene(s):
 +
*** [[B471_RS0117335]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-aferrooxidans]]
 +
* [[EDD]]
 +
** 1 associated gene(s):
 +
*** [[B471_RS0109235]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-aferrooxidans]]
 +
* [[FBA]]
 +
** 2 associated gene(s):
 +
*** [[B471_RS0118210]]
 +
*** [[B471_RS0101615]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-cljungdahlii]]
 +
*** [[orthology-bsubtilis]]
 +
*** [[orthology-aferrooxidans]]
 +
* [[FBA2]]
 +
** 1 associated gene(s):
 +
*** [[B471_RS0101615]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-bsubtilis]]
 +
* [[FBA3]]
 +
** 0 associated gene:
 +
** 1 reconstruction source(s) associated:
 +
*** [[manual-reaction_to_add_delete]]
 +
* [[FBP]]
 +
** 0 associated gene:
 +
** 1 reconstruction source(s) associated:
 +
*** [[manual-reaction_to_add_delete]]
 +
* [[G6PDH2r]]
 +
** 1 associated gene(s):
 +
*** [[B471_RS0108275]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-bsubtilis]]
 +
* [[GND]]
 +
** 2 associated gene(s):
 +
*** [[B471_RS0108280]]
 +
*** [[B471_RS0107325]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-cljungdahlii]]
 +
* [[GNK]]
 +
** 1 associated gene(s):
 +
*** [[B471_RS0113565]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-cljungdahlii]]
 +
* [[PFK]]
 +
** 0 associated gene:
 +
** 1 reconstruction source(s) associated:
 +
*** [[manual-reaction_to_add_delete]]
 +
* [[PGI]]
 +
** 1 associated gene(s):
 +
*** [[B471_RS0108285]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[orthology-cljungdahlii]]
 +
*** [[orthology-bsubtilis]]
 +
* [[PPM2]]
 +
** 1 associated gene(s):
 +
*** [[B471_RS22550]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[orthology-cljungdahlii]]
 +
*** [[orthology-bsubtilis]]
 +
* [[PRPPS]]
 +
** 1 associated gene(s):
 +
*** [[B471_RS0107450]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-cljungdahlii]]
 +
*** [[orthology-bsubtilis]]
 +
*** [[orthology-aferrooxidans]]
 +
* [[RBK]]
 +
** 1 associated gene(s):
 +
*** [[B471_RS0117105]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-bsubtilis]]
 
* [[RPE]]
 
* [[RPE]]
−
** [[pantograph]]-[[cljungdahlii]]
+
** 1 associated gene(s):
−
** [[pantograph]]-[[bsubtilis]]
+
*** [[B471_RS23765]]
−
** [[pantograph]]-[[aferrooxidans]]
+
** 3 reconstruction source(s) associated:
−
== Pathways associated ==
+
*** [[orthology-cljungdahlii]]
−
* [[map01100]]
+
*** [[orthology-bsubtilis]]
−
* [[map01110]]
+
*** [[orthology-aferrooxidans]]
−
* [[map01120]]
+
* [[RPI]]
−
* [[map00040]]
+
** 2 associated gene(s):
−
* [[map01200]]
+
*** [[B471_RS0116940]]
−
* [[map00710]]
+
*** [[B471_RS0116500]]
−
* [[map01230]]
+
** 3 reconstruction source(s) associated:
−
* [[map01130]]
+
*** [[orthology-cljungdahlii]]
−
* [[map00030]]
+
*** [[orthology-bsubtilis]]
 +
*** [[orthology-aferrooxidans]]
 +
* [[TALA]]
 +
** 3 associated gene(s):
 +
*** [[B471_RS0106410]]
 +
*** [[B471_RS0102315]]
 +
*** [[B471_RS0108285]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-cljungdahlii]]
 +
*** [[orthology-bsubtilis]]
 +
*** [[orthology-aferrooxidans]]
 +
* [[TKT1]]
 +
** 1 associated gene(s):
 +
*** [[B471_RS0108290]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[orthology-bsubtilis]]
 +
*** [[orthology-aferrooxidans]]
 +
* [[TKT2]]
 +
** 1 associated gene(s):
 +
*** [[B471_RS0108290]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[orthology-bsubtilis]]
 +
*** [[orthology-aferrooxidans]]
 +
== Reaction(s) not found ==
 +
* [http://bigg.ucsd.edu/universal/reactions/2DGLCNRy 2DGLCNRy]
 +
* [http://bigg.ucsd.edu/universal/reactions/2DHGLCK 2DHGLCK]
 +
* [http://bigg.ucsd.edu/universal/reactions/BFBP BFBP]
 +
* [http://bigg.ucsd.edu/universal/reactions/BFBPh BFBPh]
 +
* [http://bigg.ucsd.edu/universal/reactions/DASCBH DASCBH]
 +
* [http://bigg.ucsd.edu/universal/reactions/DDGLK DDGLK]
 +
* [http://bigg.ucsd.edu/universal/reactions/DDPGALA DDPGALA]
 +
* [http://bigg.ucsd.edu/universal/reactions/DKGLCNR2y DKGLCNR2y]
 +
* [http://bigg.ucsd.edu/universal/reactions/DRBK DRBK]
 +
* [http://bigg.ucsd.edu/universal/reactions/FBA3hi FBA3hi]
 +
* [http://bigg.ucsd.edu/universal/reactions/FBAf FBAf]
 +
* [http://bigg.ucsd.edu/universal/reactions/FBAh FBAh]
 +
* [http://bigg.ucsd.edu/universal/reactions/FBAm FBAm]
 +
* [http://bigg.ucsd.edu/universal/reactions/FPGPL FPGPL]
 +
* [http://bigg.ucsd.edu/universal/reactions/G6PADH G6PADH]
 +
* [http://bigg.ucsd.edu/universal/reactions/G6PADHh G6PADHh]
 +
* [http://bigg.ucsd.edu/universal/reactions/G6PBDH G6PBDH]
 +
* [http://bigg.ucsd.edu/universal/reactions/G6PBDHh G6PBDHh]
 +
* [http://bigg.ucsd.edu/universal/reactions/G6PDH1 G6PDH1]
 +
* [http://bigg.ucsd.edu/universal/reactions/G6PDH1er G6PDH1er]
 +
* [http://bigg.ucsd.edu/universal/reactions/G6PDH2er G6PDH2er]
 +
* [http://bigg.ucsd.edu/universal/reactions/G6PI G6PI]
 +
* [http://bigg.ucsd.edu/universal/reactions/G6PI2 G6PI2]
 +
* [http://bigg.ucsd.edu/universal/reactions/G6PI3 G6PI3]
 +
* [http://bigg.ucsd.edu/universal/reactions/G6PI_1 G6PI_1]
 +
* [http://bigg.ucsd.edu/universal/reactions/G6PIh G6PIh]
 +
* [http://bigg.ucsd.edu/universal/reactions/GADktpp GADktpp]
 +
* [http://bigg.ucsd.edu/universal/reactions/GLYCK2 GLYCK2]
 +
* [http://bigg.ucsd.edu/universal/reactions/GNDer GNDer]
 +
* [http://bigg.ucsd.edu/universal/reactions/GNKh GNKh]
 +
* [http://bigg.ucsd.edu/universal/reactions/PFK_3 PFK_3]
 +
* [http://bigg.ucsd.edu/universal/reactions/PFK_adp PFK_adp]
 +
* [http://bigg.ucsd.edu/universal/reactions/PFK_ppi PFK_ppi]
 +
* [http://bigg.ucsd.edu/universal/reactions/PFKh PFKh]
 +
* [http://bigg.ucsd.edu/universal/reactions/PGDHh PGDHh]
 +
* [http://bigg.ucsd.edu/universal/reactions/PGIA PGIA]
 +
* [http://bigg.ucsd.edu/universal/reactions/PGIAh PGIAh]
 +
* [http://bigg.ucsd.edu/universal/reactions/PGIBh PGIBh]
 +
* [http://bigg.ucsd.edu/universal/reactions/PGL PGL]
 +
* [http://bigg.ucsd.edu/universal/reactions/PGLCNDH PGLCNDH]
 +
* [http://bigg.ucsd.edu/universal/reactions/PGLer PGLer]
 +
* [http://bigg.ucsd.edu/universal/reactions/PGLh PGLh]
 +
* [http://bigg.ucsd.edu/universal/reactions/R15BPK R15BPK]
 +
* [http://bigg.ucsd.edu/universal/reactions/RPDPK RPDPK]
 +
* [http://bigg.ucsd.edu/universal/reactions/RPEh RPEh]
 +
* [http://bigg.ucsd.edu/universal/reactions/RPIh RPIh]
 +
* [http://bigg.ucsd.edu/universal/reactions/TAh TAh]
 +
* [http://bigg.ucsd.edu/universal/reactions/TKT1h TKT1h]
 +
* [http://bigg.ucsd.edu/universal/reactions/TKT2h TKT2h]
 
== External links  ==
 
== External links  ==
−
{{#set: reaction associated=RPE}}
+
{{#set: common_name=Pentose phosphate pathway}}
−
{{#set: pathway associated=map01100|map01110|map01120|map00040|map01200|map00710|map01230|map01130|map00030}}
+
{{#set: reaction found=20}}
 +
{{#set: total reaction=69}}
 +
{{#set: completion rate=29.0}}

Revision as of 00:49, 21 March 2018

Pathway map00030

  • common_name:
    • Pentose phosphate pathway
  • Synonym(s):

Reaction(s) found

20 reactions found over 69 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/cutigem/index.php?title=OMCDC&oldid=4367"