Difference between revisions of "METS"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PPBNGS PPBNGS] == * direction: ** LEFT-TO-RIGHT * common name: ** Porphobilinogen synthase * Synony...")
 
(Created page with "Category:Metabolite == Metabolite [http://bigg.ucsd.edu/universal/metabolites/air air] == * common name: ** 5-amino-1-(5-phospho-D-ribosyl)imidazole * Synonym(s): == Reac...")
Line 1: Line 1:
[[Category:Reaction]]
+
[[Category:Metabolite]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/PPBNGS PPBNGS] ==
+
== Metabolite [http://bigg.ucsd.edu/universal/metabolites/air air] ==
* direction:
+
** LEFT-TO-RIGHT
+
 
* common name:
 
* common name:
** Porphobilinogen synthase
+
** 5-amino-1-(5-phospho-D-ribosyl)imidazole
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
+
== Reaction(s) known to consume the compound ==
* With identifiers:
+
* [[AIRC1]]
** 2.0 [[5aop]][c] '''=>''' 2.0 [[h2o]][c] '''+''' 1.0 [[ppbng]][c] '''+''' 1.0 [[h]][c]
+
* [[AMPMS2]]
* With common name(s):
+
* [[5HBZIDS2]]
** 2.0 5-Amino-4-oxopentanoate[c] '''=>''' 2.0 H2O H2O[c] '''+''' 1.0 Porphobilinogen[c] '''+''' 1.0 H+[c]
+
== Reaction(s) known to produce the compound ==
 
+
* [[PRAIS]]
== Genes associated with this reaction  ==
+
== Reaction(s) of unknown directionality ==
Genes have been associated with this reaction based on different elements listed below.
+
* [[AIRCr]]
* [[B471_RS0108710]]
+
** [[pantograph]]-[[bsubtilis]]
+
** [[pantograph]]-[[aferrooxidans]]
+
== Pathways  ==
+
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
+
** '''472''' reactions found over '''2349''' reactions in the full pathway
+
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
+
** '''212''' reactions found over '''1054''' reactions in the full pathway
+
* [[map00860]]: [http://www.genome.jp/dbget-bin/www_bget?map00860 map00860]
+
** '''23''' reactions found over '''106''' reactions in the full pathway
+
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
+
** '''101''' reactions found over '''715''' reactions in the full pathway
+
== Reconstruction information  ==
+
* [[orthology]]:
+
** [[pantograph]]:
+
*** [[aferrooxidans]]
+
*** [[bsubtilis]]
+
 
== External links  ==
 
== External links  ==
* EC Number : 4.2.1.24
+
{{#set: common name=5-amino-1-(5-phospho-D-ribosyl)imidazole}}
* BioCyc : META:PORPHOBILSYNTH-RXN
+
{{#set: consumed by=AIRC1|AMPMS2|5HBZIDS2}}
* MetaNetX (MNX) Equation : MNXR103095
+
{{#set: produced by=PRAIS}}
* RHEA:
+
{{#set: reversible reaction associated=AIRCr}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24064 24064]
+
* Reactome : REACT_R-ATH-189439
+
* KEGG Reaction : R00036
+
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: common name=Porphobilinogen synthase}}
+
{{#set: gene associated=B471_RS0108710}}
+
{{#set: in pathway=map01100|map01110|map00860|map01120}}
+
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction source=aferrooxidans|bsubtilis}}
+

Revision as of 00:57, 21 March 2018

Metabolite air

  • common name:
    • 5-amino-1-(5-phospho-D-ribosyl)imidazole
  • Synonym(s):

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links