Difference between revisions of "HMBS"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ABUTD ABUTD] == * direction: ** LEFT-TO-RIGHT * common name: ** Aminobutyraldehyde dehydrogenase *...")
 
(Created page with "Category:Metabolite == Metabolite [http://bigg.ucsd.edu/universal/metabolites/nad nad] == * common name: ** Nicotinamide adenine dinucleotide * Synonym(s): == Reaction(s)...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://bigg.ucsd.edu/universal/reactions/ABUTD ABUTD] ==
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== Metabolite [http://bigg.ucsd.edu/universal/metabolites/nad nad] ==
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* direction:
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** LEFT-TO-RIGHT
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* common name:
 
* common name:
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** Aminobutyraldehyde dehydrogenase
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** Nicotinamide adenine dinucleotide
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[NADK]]
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** 1.0 [[4abutn]][c] '''+''' 1.0 [[nad]][c] '''+''' 1.0 [[h2o]][c] '''=>''' 1.0 [[4abut]][c] '''+''' 1.0 [[nadh]][c] '''+''' 2.0 [[h]][c]
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* [[IPMD]]
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* With common name(s):
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* [[GLYCL]]
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** 1.0 4-Aminobutanal[c] '''+''' 1.0 Nicotinamide adenine dinucleotide[c] '''+''' 1.0 H2O H2O[c] '''=>''' 1.0 4-Aminobutanoate[c] '''+''' 1.0 Nicotinamide adenine dinucleotide - reduced[c] '''+''' 2.0 H+[c]
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* [[PDH]]
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* [[HP5CD_1]]
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== Genes associated with this reaction  ==
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* [[CODH]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[ALDD31_1]]
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* [[B471_RS0119455]]
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* [[ME1]]
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** [[pantograph]]-[[bsubtilis]]
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* [[GLXO1]]
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* [[B471_RS0115620]]
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* [[NADHI]]
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** [[pantograph]]-[[bsubtilis]]
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* [[AMPMS2]]
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== Pathways  ==
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* [[UACGAMDH_CUT]]
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* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
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* [[GLYALDDr_CUT]]
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** '''472''' reactions found over '''2349''' reactions in the full pathway
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* [[SHCHD2]]
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* [[map00310]]: [http://www.genome.jp/dbget-bin/www_bget?map00310 map00310]
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* [[INS2D]]
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** '''12''' reactions found over '''138''' reactions in the full pathway
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* [[LCADi]]
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* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
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* [[THRD]]
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** '''212''' reactions found over '''1054''' reactions in the full pathway
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* [[UDPGD]]
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* [[map00561]]: [http://www.genome.jp/dbget-bin/www_bget?map00561 map00561]
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* [[SHCHD2_1]]
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** '''9''' reactions found over '''83''' reactions in the full pathway
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* [[PGCD]]
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* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
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* [[PRO1x]]
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** '''101''' reactions found over '''715''' reactions in the full pathway
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* [[IMPD]]
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* [[map00981]]: [http://www.genome.jp/dbget-bin/www_bget?map00981 map00981]
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* [[OIVD2]]
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** '''1''' reactions found over '''18''' reactions in the full pathway
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* [[NADK1]]
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* [[map00340]]: [http://www.genome.jp/dbget-bin/www_bget?map00340 map00340]
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* [[NADK3]]
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** '''14''' reactions found over '''90''' reactions in the full pathway
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* [[NADK2]]
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* [[map00625]]: [http://www.genome.jp/dbget-bin/www_bget?map00625 map00625]
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* [[NADK5]]
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** '''2''' reactions found over '''25''' reactions in the full pathway
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* [[NADK4]]
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* [[map00903]]: [http://www.genome.jp/dbget-bin/www_bget?map00903 map00903]
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* [[ALDD8]]
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** '''2''' reactions found over '''30''' reactions in the full pathway
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* [[ALDD9]]
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* [[map00620]]: [http://www.genome.jp/dbget-bin/www_bget?map00620 map00620]
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* [[ABUTD]]
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** '''22''' reactions found over '''163''' reactions in the full pathway
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* [[HISTD1_CUT]]
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* [[map00380]]: [http://www.genome.jp/dbget-bin/www_bget?map00380 map00380]
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* [[OIVD3]]
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** '''11''' reactions found over '''163''' reactions in the full pathway
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* [[ALDD1]]
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* [[map00010]]: [http://www.genome.jp/dbget-bin/www_bget?map00010 map00010]
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* [[PPND]]
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** '''20''' reactions found over '''149''' reactions in the full pathway
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* [[ALDD3]]
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* [[map00053]]: [http://www.genome.jp/dbget-bin/www_bget?map00053 map00053]
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* [[ALDD4]]
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** '''3''' reactions found over '''50''' reactions in the full pathway
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* [[ALDD5]]
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* [[map00071]]: [http://www.genome.jp/dbget-bin/www_bget?map00071 map00071]
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* [[ALDD20x_1]]
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** '''17''' reactions found over '''167''' reactions in the full pathway
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* [[ALDD7]]
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* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
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* [[ALDD12]]
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** '''148''' reactions found over '''694''' reactions in the full pathway
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* [[ALDD13]]
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* [[map00280]]: [http://www.genome.jp/dbget-bin/www_bget?map00280 map00280]
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* [[ALDD10]]
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** '''16''' reactions found over '''155''' reactions in the full pathway
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* [[ALDD2x]]
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* [[map00330]]: [http://www.genome.jp/dbget-bin/www_bget?map00330 map00330]
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* [[ALDD16]]
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** '''19''' reactions found over '''149''' reactions in the full pathway
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* [[ALDD17]]
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* [[map00410]]: [http://www.genome.jp/dbget-bin/www_bget?map00410 map00410]
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* [[ALDD14]]
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** '''9''' reactions found over '''91''' reactions in the full pathway
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* [[ALDD15]]
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== Reconstruction information  ==
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* [[P5CD]]
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* [[orthology]]:
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* [[ALDD18]]
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** [[pantograph]]:
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* [[PDX5PO2]]
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*** [[bsubtilis]]
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* [[ALDD6]]
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* [[ALDD32]]
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* [[HISTD2_AFE]]
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* [[GLUDxi_CUT]]
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* [[GCALDD]]
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* [[ALDD4x]]
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* [[HXAND]]
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* [[BIOMASS]]
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* [[SSALx]]
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* [[SBTD_D2]]
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* [[26DPAi]]
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* [[ALDD11]]
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* [[DHNAOT7]]
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* [[XAND]]
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== Reaction(s) known to produce the compound ==
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* [[EAR180x]]
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* [[EAR141x]]
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* [[NADPPPS]]
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* [[IPDPS]]
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* [[NTRIR2x]]
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* [[EAR161x]]
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* [[EAR120x]]
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* [[CYRDAR_CUT]]
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* [[EAR60x]]
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* [[EAR181x]]
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* [[EAR40x]]
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* [[EAR140x]]
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* [[NADS1]]
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* [[NADS2]]
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* [[NADH4]]
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* [[EAR160x]]
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* [[DMPPS]]
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* [[EAR121x]]
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* [[GAPDHi]]
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* [[EAR100x]]
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* [[MECDPDH2]]
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* [[EAR80x]]
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* [[TDPDRE2_AFE]]
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== Reaction(s) of unknown directionality ==
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* [[THPDH_AFE]]
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* [[ACALD]]
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* [[ACOAD1z_CUT]]
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* [[VALDHr]]
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* [[TRSARr]]
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* [[LLEUDr]]
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* [[ALAD_L]]
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* [[ALCD4]]
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* [[MDH]]
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* [[PERD]]
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* [[HOXPRx]]
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* [[ACOAD3_CUT]]
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* [[BTCOARx_CUT]]
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* [[ALCD2x]]
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* [[FRNDPR2r_CUT]]
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* [[GAPD]]
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* [[ACOAD6_CUT]]
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* [[ACOAD2_CUT]]
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* [[SUCD_AFE]]
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* [[OIVD1r]]
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* [[NMNAT_CUT]]
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* [[HACD1]]
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* [[E4PD]]
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* [[GLTPD]]
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* [[ACOAD7_CUT]]
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* [[HEMEAS_1]]
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* [[BTDD_RR]]
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* [[ACOAD4_1]]
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* [[ACOAD1]]
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* [[ILEDHr]]
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* [[ACOAD5_1]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: common name=Nicotinamide adenine dinucleotide}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19105 19105]
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{{#set: consumed by=NADK|IPMD|GLYCL|PDH|HP5CD_1|CODH|ALDD31_1|ME1|GLXO1|NADHI|AMPMS2|UACGAMDH_CUT|GLYALDDr_CUT|SHCHD2|INS2D|LCADi|THRD|UDPGD|SHCHD2_1|PGCD|PRO1x|IMPD|OIVD2|NADK1|NADK3|NADK2|NADK5|NADK4|ALDD8|ALDD9|ABUTD|HISTD1_CUT|OIVD3|ALDD1|PPND|ALDD3|ALDD4|ALDD5|ALDD20x_1|ALDD7|ALDD12|ALDD13|ALDD10|ALDD2x|ALDD16|ALDD17|ALDD14|ALDD15|P5CD|ALDD18|PDX5PO2|ALDD6|ALDD32|HISTD2_AFE|GLUDxi_CUT|GCALDD|ALDD4x|HXAND|BIOMASS|SSALx|SBTD_D2|26DPAi|ALDD11|DHNAOT7|XAND}}
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* BioCyc : META:AMINOBUTDEHYDROG-RXN
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{{#set: produced by=EAR180x|EAR141x|NADPPPS|IPDPS|NTRIR2x|EAR161x|EAR120x|CYRDAR_CUT|EAR60x|EAR181x|EAR40x|EAR140x|NADS1|NADS2|NADH4|EAR160x|DMPPS|EAR121x|GAPDHi|EAR100x|MECDPDH2|EAR80x|TDPDRE2_AFE}}
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* MetaNetX (MNX) Equation : MNXR95191
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{{#set: reversible reaction associated=THPDH_AFE|ACALD|ACOAD1z_CUT|VALDHr|TRSARr|LLEUDr|ALAD_L|ALCD4|MDH|PERD|HOXPRx|ACOAD3_CUT|BTCOARx_CUT|ALCD2x|FRNDPR2r_CUT|GAPD|ACOAD6_CUT|ACOAD2_CUT|SUCD_AFE|OIVD1r|NMNAT_CUT|HACD1|E4PD|GLTPD|ACOAD7_CUT|HEMEAS_1|BTDD_RR|ACOAD4_1|ACOAD1|ILEDHr|ACOAD5_1}}
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* KEGG Reaction : R02549
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* EC Number : 1.2.1.-
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Aminobutyraldehyde dehydrogenase}}
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{{#set: gene associated=B471_RS0119455|B471_RS0115620}}
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{{#set: in pathway=map01100|map00310|map01110|map00561|map01120|map00981|map00340|map00625|map00903|map00620|map00380|map00010|map00053|map00071|map01130|map00280|map00330|map00410}}
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−
{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=bsubtilis}}
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Revision as of 01:00, 21 March 2018

Metabolite nad

  • common name:
    • Nicotinamide adenine dinucleotide
  • Synonym(s):

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

Retrieved from "http://gem-aureme.irisa.fr/cutigem/index.php?title=HMBS&oldid=4823"