Difference between revisions of "PGM"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/TDPGDH TDPGDH] == * direction: ** LEFT-TO-RIGHT * common name: ** DTDPglucose 4,6-dehydratase * Syn...")
 
(Created page with "Category:Metabolite == Metabolite [http://bigg.ucsd.edu/universal/metabolites/dkmpp dkmpp] == * common name: ** 2,3-diketo-5-methylthio-1-phosphopentane * Synonym(s): ==...")
Line 1: Line 1:
[[Category:Reaction]]
+
[[Category:Metabolite]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/TDPGDH TDPGDH] ==
+
== Metabolite [http://bigg.ucsd.edu/universal/metabolites/dkmpp dkmpp] ==
* direction:
+
** LEFT-TO-RIGHT
+
 
* common name:
 
* common name:
** DTDPglucose 4,6-dehydratase
+
** 2,3-diketo-5-methylthio-1-phosphopentane
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
+
== Reaction(s) known to consume the compound ==
* With identifiers:
+
== Reaction(s) known to produce the compound ==
** 1.0 [[dtdpglu]][c] '''=>''' 1.0 [[h2o]][c] '''+''' 1.0 [[dtdp4d6dg]][c]
+
== Reaction(s) of unknown directionality ==
* With common name(s):
+
* [[DM1PE]]
** 1.0 DTDPglucose[c] '''=>''' 1.0 H2O H2O[c] '''+''' 1.0 DTDP-4-dehydro-6-deoxy-D-glucose[c]
+
 
+
== Genes associated with this reaction  ==
+
Genes have been associated with this reaction based on different elements listed below.
+
* [[B471_RS0104495]]
+
** [[pantograph]]-[[cljungdahlii]]
+
** [[pantograph]]-[[aferrooxidans]]
+
== Pathways  ==
+
* [[map00521]]: [http://www.genome.jp/dbget-bin/www_bget?map00521 map00521]
+
** '''8''' reactions found over '''14''' reactions in the full pathway
+
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
+
** '''148''' reactions found over '''694''' reactions in the full pathway
+
* [[map00523]]: [http://www.genome.jp/dbget-bin/www_bget?map00523 map00523]
+
** '''4''' reactions found over '''4''' reactions in the full pathway
+
* [[map00525]]: [http://www.genome.jp/dbget-bin/www_bget?map00525 map00525]
+
** '''2''' reactions found over '''2''' reactions in the full pathway
+
* [[map01055]]: [http://www.genome.jp/dbget-bin/www_bget?map01055 map01055]
+
** '''1''' reactions found over '''1''' reactions in the full pathway
+
== Reconstruction information  ==
+
* [[orthology]]:
+
** [[pantograph]]:
+
*** [[aferrooxidans]]
+
*** [[cljungdahlii]]
+
 
== External links  ==
 
== External links  ==
* RHEA:
+
{{#set: common name=2,3-diketo-5-methylthio-1-phosphopentane}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17221 17221]
+
{{#set: reversible reaction associated=DM1PE}}
* BioCyc : META:DTDPGLUCDEHYDRAT-RXN
+
* MetaNetX (MNX) Equation : MNXR104761
+
* KEGG Reaction : R06513
+
* EC Number : 4.2.1.46
+
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: common name=DTDPglucose 4,6-dehydratase}}
+
{{#set: gene associated=B471_RS0104495}}
+
{{#set: in pathway=map00521|map01130|map00523|map00525|map01055}}
+
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction source=aferrooxidans|cljungdahlii}}
+

Revision as of 01:03, 21 March 2018

Metabolite dkmpp

  • common name:
    • 2,3-diketo-5-methylthio-1-phosphopentane
  • Synonym(s):

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links