Difference between revisions of "Map01210"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/NTPP3 NTPP3] == * direction: ** LEFT-TO-RIGHT * common name: ** Nucleoside triphosphate pyrophospho...")
 
(Created page with "Category:Pathway == Pathway [http://www.genome.jp/dbget-bin/www_bget?map01210 map01210] == * common_name: ** 2-Oxocarboxylic acid metabolism * Synonym(s): == Reaction(s)...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://bigg.ucsd.edu/universal/reactions/NTPP3 NTPP3] ==
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== Pathway [http://www.genome.jp/dbget-bin/www_bget?map01210 map01210] ==
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* direction:
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* common_name:
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** LEFT-TO-RIGHT
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** 2-Oxocarboxylic acid metabolism
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* common name:
+
−
** Nucleoside triphosphate pyrophosphorylase (dctp)
+
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''26''' reactions found over '''80''' reactions in the full pathway
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** 1.0 [[dctp]][c] '''+''' 1.0 [[h2o]][c] '''=>''' 1.0 [[ppi]][c] '''+''' 1.0 [[dcmp]][c] '''+''' 1.0 [[h]][c]
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* [[ACGK]]
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* With common name(s):
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** 2 associated gene(s):
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** 1.0 DCTP C9H12N3O13P3[c] '''+''' 1.0 H2O H2O[c] '''=>''' 1.0 Diphosphate[c] '''+''' 1.0 DCMP C9H12N3O7P[c] '''+''' 1.0 H+[c]
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*** [[B471_RS23385]]
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*** [[B471_RS21960]]
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== Genes associated with this reaction  ==
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** 3 reconstruction source(s) associated:
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-cljungdahlii]]
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* [[B471_RS0107495]]
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*** [[orthology-bsubtilis]]
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** [[pantograph]]-[[cljungdahlii]]
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*** [[orthology-aferrooxidans]]
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== Pathways  ==
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* [[ACGS]]
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* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
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** 3 associated gene(s):
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** '''68''' reactions found over '''244''' reactions in the full pathway
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*** [[B471_RS0117540]]
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* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
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*** [[B471_RS21960]]
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** '''472''' reactions found over '''2349''' reactions in the full pathway
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*** [[B471_RS23385]]
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== Reconstruction information  ==
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** 3 reconstruction source(s) associated:
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* [[orthology]]:
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*** [[orthology-cljungdahlii]]
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** [[pantograph]]:
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*** [[orthology-bsubtilis]]
−
*** [[cljungdahlii]]
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*** [[orthology-aferrooxidans]]
 +
* [[ACHBS]]
 +
** 0 associated gene:
 +
** 1 reconstruction source(s) associated:
 +
*** [[manual-reaction_to_add_delete]]
 +
* [[ACLS]]
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** 1 associated gene(s):
 +
*** [[B471_RS0108550]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-cljungdahlii]]
 +
* [[ACONT]]
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** 1 associated gene(s):
 +
*** [[B471_RS0105965]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[orthology-cljungdahlii]]
 +
*** [[orthology-bsubtilis]]
 +
* [[ACONTa]]
 +
** 1 associated gene(s):
 +
*** [[B471_RS0105965]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[orthology-cljungdahlii]]
 +
*** [[orthology-aferrooxidans]]
 +
* [[ACONTb]]
 +
** 1 associated gene(s):
 +
*** [[B471_RS0105965]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[orthology-cljungdahlii]]
 +
*** [[orthology-aferrooxidans]]
 +
* [[ACOTA]]
 +
** 1 associated gene(s):
 +
*** [[B471_RS0117530]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[orthology-cljungdahlii]]
 +
*** [[orthology-aferrooxidans]]
 +
* [[AGPR]]
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** 1 associated gene(s):
 +
*** [[B471_RS0117545]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-cljungdahlii]]
 +
*** [[orthology-bsubtilis]]
 +
*** [[orthology-aferrooxidans]]
 +
* [[ASAD]]
 +
** 1 associated gene(s):
 +
*** [[B471_RS0100620]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-cljungdahlii]]
 +
*** [[orthology-bsubtilis]]
 +
*** [[orthology-aferrooxidans]]
 +
* [[ASPK]]
 +
** 2 associated gene(s):
 +
*** [[B471_RS0100615]]
 +
*** [[B471_RS0107565]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-cljungdahlii]]
 +
*** [[orthology-bsubtilis]]
 +
*** [[orthology-aferrooxidans]]
 +
* [[ASPTA]]
 +
** 1 associated gene(s):
 +
*** [[B471_RS0109180]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-cljungdahlii]]
 +
*** [[orthology-bsubtilis]]
 +
*** [[orthology-aferrooxidans]]
 +
* [[CS]]
 +
** 1 associated gene(s):
 +
*** [[B471_RS0109275]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[orthology-bsubtilis]]
 +
*** [[orthology-aferrooxidans]]
 +
* [[DHAD1]]
 +
** 1 associated gene(s):
 +
*** [[B471_RS0117830]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[orthology-cljungdahlii]]
 +
*** [[orthology-bsubtilis]]
 +
* [[DHAD2]]
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** 1 associated gene(s):
 +
*** [[B471_RS0117830]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-cljungdahlii]]
 +
*** [[orthology-bsubtilis]]
 +
*** [[orthology-aferrooxidans]]
 +
* [[ICDHyr]]
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** 0 associated gene:
 +
** 1 reconstruction source(s) associated:
 +
*** [[manual-reaction_to_add_delete]]
 +
* [[ILETA]]
 +
** 4 associated gene(s):
 +
*** [[B471_RS0110105]]
 +
*** [[B471_RS0102340]]
 +
*** [[B471_RS0106435]]
 +
*** [[B471_RS0109150]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-cljungdahlii]]
 +
*** [[orthology-bsubtilis]]
 +
*** [[orthology-aferrooxidans]]
 +
* [[IPMD]]
 +
** 1 associated gene(s):
 +
*** [[B471_RS0108545]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-cljungdahlii]]
 +
*** [[orthology-bsubtilis]]
 +
*** [[orthology-aferrooxidans]]
 +
* [[IPPMIa]]
 +
** 3 associated gene(s):
 +
*** [[B471_RS0105525]]
 +
*** [[B471_RS0105965]]
 +
*** [[B471_RS0105520]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[orthology-cljungdahlii]]
 +
*** [[orthology-bsubtilis]]
 +
* [[IPPMIb]]
 +
** 3 associated gene(s):
 +
*** [[B471_RS0105965]]
 +
*** [[B471_RS0105520]]
 +
*** [[B471_RS0105525]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[orthology-cljungdahlii]]
 +
*** [[orthology-bsubtilis]]
 +
* [[IPPS]]
 +
** 1 associated gene(s):
 +
*** [[B471_RS21670]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[orthology-cljungdahlii]]
 +
*** [[orthology-bsubtilis]]
 +
* [[LEUTA]]
 +
** 4 associated gene(s):
 +
*** [[B471_RS0106435]]
 +
*** [[B471_RS0110105]]
 +
*** [[B471_RS0102340]]
 +
*** [[B471_RS0109150]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-cljungdahlii]]
 +
*** [[orthology-bsubtilis]]
 +
*** [[orthology-aferrooxidans]]
 +
* [[OMCDC]]
 +
** 0 associated gene:
 +
** 1 reconstruction source(s) associated:
 +
*** [[manual-reaction_to_add_delete]]
 +
* [[ORNTAC]]
 +
** 3 associated gene(s):
 +
*** [[B471_RS23385]]
 +
*** [[B471_RS0117540]]
 +
*** [[B471_RS21960]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[orthology-cljungdahlii]]
 +
*** [[orthology-aferrooxidans]]
 +
* [[PHETA1]]
 +
** 3 associated gene(s):
 +
*** [[B471_RS0109180]]
 +
*** [[B471_RS23525]]
 +
*** [[B471_RS0118315]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-cljungdahlii]]
 +
*** [[orthology-bsubtilis]]
 +
*** [[orthology-aferrooxidans]]
 +
* [[VALTA]]
 +
** 4 associated gene(s):
 +
*** [[B471_RS0109150]]
 +
*** [[B471_RS0110105]]
 +
*** [[B471_RS0106435]]
 +
*** [[B471_RS0102340]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-cljungdahlii]]
 +
*** [[orthology-bsubtilis]]
 +
*** [[orthology-aferrooxidans]]
 +
== Reaction(s) not found ==
 +
* [http://bigg.ucsd.edu/universal/reactions/AATA AATA]
 +
* [http://bigg.ucsd.edu/universal/reactions/ACGKm ACGKm]
 +
* [http://bigg.ucsd.edu/universal/reactions/ACGSm ACGSm]
 +
* [http://bigg.ucsd.edu/universal/reactions/ACHBSm ACHBSm]
 +
* [http://bigg.ucsd.edu/universal/reactions/ACLSm ACLSm]
 +
* [http://bigg.ucsd.edu/universal/reactions/ACODA ACODA]
 +
* [http://bigg.ucsd.edu/universal/reactions/ACONTm ACONTm]
 +
* [http://bigg.ucsd.edu/universal/reactions/ACONTx ACONTx]
 +
* [http://bigg.ucsd.edu/universal/reactions/ACOTAim ACOTAim]
 +
* [http://bigg.ucsd.edu/universal/reactions/AGPRim AGPRim]
 +
* [http://bigg.ucsd.edu/universal/reactions/ALATA_L ALATA_L]
 +
* [http://bigg.ucsd.edu/universal/reactions/ALATA_Lm ALATA_Lm]
 +
* [http://bigg.ucsd.edu/universal/reactions/ASADH ASADH]
 +
* [http://bigg.ucsd.edu/universal/reactions/ASPATh ASPATh]
 +
* [http://bigg.ucsd.edu/universal/reactions/ASPK_1 ASPK_1]
 +
* [http://bigg.ucsd.edu/universal/reactions/ASPTAm ASPTAm]
 +
* [http://bigg.ucsd.edu/universal/reactions/ASPTAp ASPTAp]
 +
* [http://bigg.ucsd.edu/universal/reactions/BCTA_glu_h BCTA_glu_h]
 +
* [http://bigg.ucsd.edu/universal/reactions/BCTA_val_h BCTA_val_h]
 +
* [http://bigg.ucsd.edu/universal/reactions/BCTAh BCTAh]
 +
* [http://bigg.ucsd.edu/universal/reactions/CH2ACH CH2ACH]
 +
* [http://bigg.ucsd.edu/universal/reactions/CH3ACH CH3ACH]
 +
* [http://bigg.ucsd.edu/universal/reactions/CITCIb CITCIb]
 +
* [http://bigg.ucsd.edu/universal/reactions/CSm CSm]
 +
* [http://bigg.ucsd.edu/universal/reactions/CSp CSp]
 +
* [http://bigg.ucsd.edu/universal/reactions/DABAAT DABAAT]
 +
* [http://bigg.ucsd.edu/universal/reactions/DHAD1m DHAD1m]
 +
* [http://bigg.ucsd.edu/universal/reactions/DHAD2m DHAD2m]
 +
* [http://bigg.ucsd.edu/universal/reactions/DHAD_3mob_h DHAD_3mob_h]
 +
* [http://bigg.ucsd.edu/universal/reactions/DHADh DHADh]
 +
* [http://bigg.ucsd.edu/universal/reactions/HICITDm HICITDm]
 +
* [http://bigg.ucsd.edu/universal/reactions/ICDHhr ICDHhr]
 +
* [http://bigg.ucsd.edu/universal/reactions/ICDHx ICDHx]
 +
* [http://bigg.ucsd.edu/universal/reactions/ICDHxm ICDHxm]
 +
* [http://bigg.ucsd.edu/universal/reactions/ICDHym ICDHym]
 +
* [http://bigg.ucsd.edu/universal/reactions/ICDHyp ICDHyp]
 +
* [http://bigg.ucsd.edu/universal/reactions/ILETAm ILETAm]
 +
* [http://bigg.ucsd.edu/universal/reactions/IPPSh IPPSh]
 +
* [http://bigg.ucsd.edu/universal/reactions/IPPSm IPPSm]
 +
* [http://bigg.ucsd.edu/universal/reactions/KARI KARI]
 +
* [http://bigg.ucsd.edu/universal/reactions/KARI_23dhmb KARI_23dhmb]
 +
* [http://bigg.ucsd.edu/universal/reactions/KARI_23dhmp KARI_23dhmp]
 +
* [http://bigg.ucsd.edu/universal/reactions/KARI_3hmoa KARI_3hmoa]
 +
* [http://bigg.ucsd.edu/universal/reactions/LEUTAi LEUTAi]
 +
* [http://bigg.ucsd.edu/universal/reactions/LEUTAm LEUTAm]
 +
* [http://bigg.ucsd.edu/universal/reactions/OMCDCm OMCDCm]
 +
* [http://bigg.ucsd.edu/universal/reactions/ORNTACim ORNTACim]
 +
* [http://bigg.ucsd.edu/universal/reactions/OXAGm OXAGm]
 +
* [http://bigg.ucsd.edu/universal/reactions/PHETA1m PHETA1m]
 +
* [http://bigg.ucsd.edu/universal/reactions/POATh POATh]
 +
* [http://bigg.ucsd.edu/universal/reactions/PPATDh PPATDh]
 +
* [http://bigg.ucsd.edu/universal/reactions/RH2CD RH2CD]
 +
* [http://bigg.ucsd.edu/universal/reactions/RH3CD RH3CD]
 +
* [http://bigg.ucsd.edu/universal/reactions/VALTAim VALTAim]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: common_name=2-Oxocarboxylic acid metabolism}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22636 22636]
+
{{#set: reaction found=26}}
−
* BioCyc : META:DCTP-PYROPHOSPHATASE-RXN
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{{#set: total reaction=80}}
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* MetaNetX (MNX) Equation : MNXR97203
+
{{#set: completion rate=33.0}}
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* KEGG Reaction : R01668
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−
* EC Number : 3.6.1.12
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−
{{#set: direction=LEFT-TO-RIGHT}}
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−
{{#set: common name=Nucleoside triphosphate pyrophosphorylase (dctp)}}
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−
{{#set: gene associated=B471_RS0107495}}
+
−
{{#set: in pathway=map00240|map01100}}
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−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=cljungdahlii}}
+

Latest revision as of 15:14, 21 March 2018

Pathway map01210

  • common_name:
    • 2-Oxocarboxylic acid metabolism
  • Synonym(s):

Reaction(s) found

26 reactions found over 80 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/cutigem/index.php?title=Map01210&oldid=6407"