Difference between revisions of "Map00053"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ORPT ORPT] == * direction: ** REVERSIBLE * common name: ** Orotate phosphoribosyltransferase * Syno...")
(Created page with "Category:Pathway == Pathway [http://www.genome.jp/dbget-bin/www_bget?map00053 map00053] == * common_name: ** Ascorbate and aldarate metabolism * Synonym(s): == Reaction(s...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Pathway]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/ORPT ORPT] ==
+
== Pathway [http://www.genome.jp/dbget-bin/www_bget?map00053 map00053] ==
−
* direction:
+
* common_name:
−
** REVERSIBLE
+
** Ascorbate and aldarate metabolism
−
* common name:
+
−
** Orotate phosphoribosyltransferase
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
'''3''' reactions found over '''50''' reactions in the full pathway
−
** 1.0 [[ppi]][c] '''+''' 1.0 [[orot5p]][c] '''<=>''' 1.0 [[prpp]][c] '''+''' 1.0 [[orot]][c]
+
* [[ABUTD]]
−
* With common name(s):
+
** 2 associated gene(s):
−
** 1.0 Diphosphate[c] '''+''' 1.0 Orotidine 5'-phosphate[c] '''<=>''' 1.0 5-Phospho-alpha-D-ribose 1-diphosphate[c] '''+''' 1.0 Orotate C5H3N2O4[c]
+
*** [[B471_RS0119455]]
−
 
+
*** [[B471_RS0115620]]
−
== Genes associated with this reaction  ==
+
** 1 reconstruction source(s) associated:
−
Genes have been associated with this reaction based on different elements listed below.
+
*** [[orthology-bsubtilis]]
−
* [[B471_RS0109125]]
+
* [[RBP4E]]
−
** [[pantograph]]-[[cljungdahlii]]
+
** 1 associated gene(s):
−
** [[pantograph]]-[[aferrooxidans]]
+
*** [[B471_RS0112070]]
−
== Pathways  ==
+
** 2 reconstruction source(s) associated:
−
* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
+
*** [[orthology-cljungdahlii]]
−
** '''68''' reactions found over '''244''' reactions in the full pathway
+
*** [[orthology-bsubtilis]]
−
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
+
* [[UDPGD]]
−
** '''471''' reactions found over '''2349''' reactions in the full pathway
+
** 2 associated gene(s):
−
* [[map00983]]: [http://www.genome.jp/dbget-bin/www_bget?map00983 map00983]
+
*** [[B471_RS0114430]]
−
** '''22''' reactions found over '''72''' reactions in the full pathway
+
*** [[B471_RS0114260]]
−
== Reconstruction information  ==
+
** 3 reconstruction source(s) associated:
−
* Category: [[orthology]]
+
*** [[orthology-cljungdahlii]]
−
** Source: [[orthology-cljungdahlii]]
+
*** [[orthology-bsubtilis]]
−
*** Tool: [[pantograph]]
+
*** [[orthology-aferrooxidans]]
−
** Source: [[orthology-aferrooxidans]]
+
== Reaction(s) not found ==
−
*** Tool: [[pantograph]]
+
* [http://bigg.ucsd.edu/universal/reactions/3KGK 3KGK]
 +
* [http://bigg.ucsd.edu/universal/reactions/4ABUTD 4ABUTD]
 +
* [http://bigg.ucsd.edu/universal/reactions/5HOXINDACTOX 5HOXINDACTOX]
 +
* [http://bigg.ucsd.edu/universal/reactions/5HOXINDACTOXm 5HOXINDACTOXm]
 +
* [http://bigg.ucsd.edu/universal/reactions/ABOR ABOR]
 +
* [http://bigg.ucsd.edu/universal/reactions/ABUTDm ABUTDm]
 +
* [http://bigg.ucsd.edu/universal/reactions/ALDD20x ALDD20x]
 +
* [http://bigg.ucsd.edu/universal/reactions/ALDD20xm ALDD20xm]
 +
* [http://bigg.ucsd.edu/universal/reactions/ALDH ALDH]
 +
* [http://bigg.ucsd.edu/universal/reactions/ASCBPL ASCBPL]
 +
* [http://bigg.ucsd.edu/universal/reactions/BILIRBU BILIRBU]
 +
* [http://bigg.ucsd.edu/universal/reactions/DASCBH DASCBH]
 +
* [http://bigg.ucsd.edu/universal/reactions/DOGULND1 DOGULND1]
 +
* [http://bigg.ucsd.edu/universal/reactions/DOGULND2 DOGULND2]
 +
* [http://bigg.ucsd.edu/universal/reactions/DOGULNR DOGULNR]
 +
* [http://bigg.ucsd.edu/universal/reactions/GALCTD GALCTD]
 +
* [http://bigg.ucsd.edu/universal/reactions/GALT GALT]
 +
* [http://bigg.ucsd.edu/universal/reactions/GLACO GLACO]
 +
* [http://bigg.ucsd.edu/universal/reactions/GLACOm GLACOm]
 +
* [http://bigg.ucsd.edu/universal/reactions/GLCRAL GLCRAL]
 +
* [http://bigg.ucsd.edu/universal/reactions/GLCRD GLCRD]
 +
* [http://bigg.ucsd.edu/universal/reactions/GLNLASEer GLNLASEer]
 +
* [http://bigg.ucsd.edu/universal/reactions/GLRASE GLRASE]
 +
* [http://bigg.ucsd.edu/universal/reactions/GLYALDDr GLYALDDr]
 +
* [http://bigg.ucsd.edu/universal/reactions/GULND GULND]
 +
* [http://bigg.ucsd.edu/universal/reactions/GULNDer GULNDer]
 +
* [http://bigg.ucsd.edu/universal/reactions/IMACTD IMACTD]
 +
* [http://bigg.ucsd.edu/universal/reactions/IMACTD_m IMACTD_m]
 +
* [http://bigg.ucsd.edu/universal/reactions/INOSTO INOSTO]
 +
* [http://bigg.ucsd.edu/universal/reactions/KG6PDC KG6PDC]
 +
* [http://bigg.ucsd.edu/universal/reactions/NABTNO NABTNO]
 +
* [http://bigg.ucsd.edu/universal/reactions/NABTNOm NABTNOm]
 +
* [http://bigg.ucsd.edu/universal/reactions/PYLALDOX PYLALDOX]
 +
* [http://bigg.ucsd.edu/universal/reactions/PYLALDOXm PYLALDOXm]
 +
* [http://bigg.ucsd.edu/universal/reactions/R03184_PLUS_R00647 R03184_PLUS_R00647]
 +
* [http://bigg.ucsd.edu/universal/reactions/UDPGNP UDPGNP]
 +
* [http://bigg.ucsd.edu/universal/reactions/UGT1A10r UGT1A10r]
 +
* [http://bigg.ucsd.edu/universal/reactions/UGT1A1r UGT1A1r]
 +
* [http://bigg.ucsd.edu/universal/reactions/UGT1A3r UGT1A3r]
 +
* [http://bigg.ucsd.edu/universal/reactions/UGT1A4r UGT1A4r]
 +
* [http://bigg.ucsd.edu/universal/reactions/UGT1A5r UGT1A5r]
 +
* [http://bigg.ucsd.edu/universal/reactions/UGT1A6r UGT1A6r]
 +
* [http://bigg.ucsd.edu/universal/reactions/UGT1A7r UGT1A7r]
 +
* [http://bigg.ucsd.edu/universal/reactions/UGT1A8r UGT1A8r]
 +
* [http://bigg.ucsd.edu/universal/reactions/UROLACer UROLACer]
 +
* [http://bigg.ucsd.edu/universal/reactions/X5PL3E X5PL3E]
 +
* [http://bigg.ucsd.edu/universal/reactions/XYLK2 XYLK2]
 
== External links  ==
 
== External links  ==
−
* EC Number : 2.4.2.10
+
{{#set: common_name=Ascorbate and aldarate metabolism}}
−
* BioCyc : META:OROPRIBTRANS-RXN
+
{{#set: reaction found=3}}
−
* MetaNetX (MNX) Equation : MNXR102231
+
{{#set: total reaction=50}}
−
* RHEA:
+
{{#set: completion rate=6.0}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10380 10380]
+
−
* Reactome : REACT_R-ATH-73567
+
−
* KEGG Reaction : R01870
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: common name=Orotate phosphoribosyltransferase}}
+
−
{{#set: gene associated=B471_RS0109125}}
+
−
{{#set: in pathway=map00240|map01100|map00983}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction source=orthology-cljungdahlii|orthology-aferrooxidans}}
+
−
{{#set: reconstruction tool=pantograph}}
+

Latest revision as of 15:15, 21 March 2018

Pathway map00053

  • common_name:
    • Ascorbate and aldarate metabolism
  • Synonym(s):

Reaction(s) found

3 reactions found over 50 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/cutigem/index.php?title=Map00053&oldid=6424"