|
|
| Line 1: |
Line 1: |
| − | [[Category:Reaction]] | + | [[Category:Metabolite]] |
| − | == Reaction [http://bigg.ucsd.edu/universal/reactions/GLYCTO1 GLYCTO1] == | + | == Metabolite [http://bigg.ucsd.edu/universal/metabolites/murein4p4p murein4p4p] == |
| − | * direction:
| + | |
| − | ** LEFT-TO-RIGHT
| + | |
| | * common name: | | * common name: |
| − | ** Glycolate oxidase | + | ** Two linked disacharide tetrapeptide murein units (uncrosslinked, middle of chain) |
| | * Synonym(s): | | * Synonym(s): |
| | | | |
| − | == Reaction Formula == | + | == Reaction(s) known to consume the compound == |
| − | * With identifiers:
| + | * [[BIOMASS]] |
| − | ** 1.0 [[glyclt]][c] '''+''' 1.0 [[o2]][c] '''=>''' 1.0 [[glx]][c] '''+''' 1.0 [[h2o2]][c]
| + | * [[EX_murein4p4p]] |
| − | * With common name(s):
| + | == Reaction(s) known to produce the compound == |
| − | ** 1.0 Glycolate C2H3O3[c] '''+''' 1.0 O2 O2[c] '''=>''' 1.0 Glyoxylate[c] '''+''' 1.0 Hydrogen peroxide[c]
| + | * [[MDDCP4ex]] |
| − | | + | == Reaction(s) of unknown directionality == |
| − | == Genes associated with this reaction == | + | |
| − | Genes have been associated with this reaction based on different elements listed below.
| + | |
| − | * [[B471_RS0100385]] | + | |
| − | ** [[pantograph]]-[[aferrooxidans]]
| + | |
| − | * [[B471_RS0103425]]
| + | |
| − | ** [[pantograph]]-[[bsubtilis]]
| + | |
| − | * [[B471_RS0100380]]
| + | |
| − | ** [[pantograph]]-[[bsubtilis]]
| + | |
| − | ** [[pantograph]]-[[aferrooxidans]]
| + | |
| − | * [[B471_RS21575]]
| + | |
| − | ** [[pantograph]]-[[bsubtilis]]
| + | |
| − | ** [[pantograph]]-[[aferrooxidans]]
| + | |
| − | * [[B471_RS0100405]]
| + | |
| − | ** [[pantograph]]-[[aferrooxidans]]
| + | |
| − | * [[B471_RS21905]]
| + | |
| − | ** [[pantograph]]-[[bsubtilis]]
| + | |
| − | * [[B471_RS23835]]
| + | |
| − | ** [[pantograph]]-[[bsubtilis]]
| + | |
| − | == Pathways == | + | |
| − | * [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100] | + | |
| − | ** '''471''' reactions found over '''2349''' reactions in the full pathway
| + | |
| − | * [[map00630]]: [http://www.genome.jp/dbget-bin/www_bget?map00630 map00630]
| + | |
| − | ** '''23''' reactions found over '''129''' reactions in the full pathway
| + | |
| − | * [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
| + | |
| − | ** '''212''' reactions found over '''1054''' reactions in the full pathway
| + | |
| − | * [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
| + | |
| − | ** '''101''' reactions found over '''715''' reactions in the full pathway
| + | |
| − | * [[map01200]]: [http://www.genome.jp/dbget-bin/www_bget?map01200 map01200]
| + | |
| − | ** '''51''' reactions found over '''220''' reactions in the full pathway
| + | |
| − | * [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
| + | |
| − | ** '''148''' reactions found over '''694''' reactions in the full pathway
| + | |
| − | == Reconstruction information == | + | |
| − | * Category: [[orthology]]
| + | |
| − | ** Source: [[orthology-bsubtilis]]
| + | |
| − | *** Tool: [[pantograph]]
| + | |
| − | ** Source: [[orthology-aferrooxidans]]
| + | |
| − | *** Tool: [[pantograph]]
| + | |
| | == External links == | | == External links == |
| − | * EC Number : 1.1.3.15
| + | {{#set: common name=Two linked disacharide tetrapeptide murein units (uncrosslinked, middle of chain)}} |
| − | * BioCyc : META:RXN-969
| + | {{#set: consumed by=BIOMASS|EX_murein4p4p}} |
| − | * MetaNetX (MNX) Equation : MNXR100338
| + | {{#set: produced by=MDDCP4ex}} |
| − | * RHEA:
| + | |
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25311 25311]
| + | |
| − | * Reactome : REACT_R-ATH-389842
| + | |
| − | * KEGG Reaction : R00475
| + | |
| − | {{#set: direction=LEFT-TO-RIGHT}}
| + | |
| − | {{#set: common name=Glycolate oxidase}} | + | |
| − | {{#set: gene associated=B471_RS0100385|B471_RS0103425|B471_RS0100380|B471_RS21575|B471_RS0100405|B471_RS21905|B471_RS23835}}
| + | |
| − | {{#set: in pathway=map01100|map00630|map01110|map01120|map01200|map01130}}
| + | |
| − | {{#set: reconstruction category=orthology}}
| + | |
| − | {{#set: reconstruction source=orthology-bsubtilis|orthology-aferrooxidans}} | + | |
| − | {{#set: reconstruction tool=pantograph}} | + | |
