Difference between revisions of "THDPS"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/MCITL2 MCITL2] == * direction: ** REVERSIBLE * common name: ** Methylisocitrate lyase * Synonym(s):...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/THDPS THDPS] == * direction: ** LEFT-TO-RIGHT * common name: ** Tetrahydrodipicolinate succinylase...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/MCITL2 MCITL2] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/THDPS THDPS] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Methylisocitrate lyase
+
** Tetrahydrodipicolinate succinylase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[micit]][c] '''<=>''' 1.0 [[pyr]][c] '''+''' 1.0 [[succ]][c]
+
** 1.0 [[succoa]][c] '''+''' 1.0 [[thdp]][c] '''+''' 1.0 [[h2o]][c] '''=>''' 1.0 [[coa]][c] '''+''' 1.0 [[sl2a6o]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 Methylisocitrate[c] '''<=>''' 1.0 Pyruvate[c] '''+''' 1.0 Succinate[c]
+
** 1.0 Succinyl-CoA[c] '''+''' 1.0 2,3,4,5-Tetrahydrodipicolinate[c] '''+''' 1.0 H2O H2O[c] '''=>''' 1.0 Coenzyme A[c] '''+''' 1.0 N-Succinyl-2-L-amino-6-oxoheptanedioate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[B471_RS0101440]]
 
−
** [[pantograph]]-[[bsubtilis]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[map00640]]: [http://www.genome.jp/dbget-bin/www_bget?map00640 map00640]
+
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
−
** '''15''' reactions found over '''143''' reactions in the full pathway
+
** '''471''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
 +
** '''101''' reactions found over '''715''' reactions in the full pathway
 +
* [[map00300]]: [http://www.genome.jp/dbget-bin/www_bget?map00300 map00300]
 +
** '''10''' reactions found over '''34''' reactions in the full pathway
 +
* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
 +
** '''78''' reactions found over '''228''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[manual]]
−
** [[pantograph]]:
+
** Source: [[manual-reaction_to_add_delete]]
−
*** [[bsubtilis]]
+
*** Comment: [[reaction added from literature evidence or biological expertise]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16809 16809]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17325 17325]
−
* BioCyc : META:METHYLISOCITRATE-LYASE-RXN
+
* BioCyc : META:TETHYDPICSUCC-RXN
−
* MetaNetX (MNX) Equation : MNXR101415
+
* MetaNetX (MNX) Equation : MNXR104806
−
* KEGG Reaction : R00409
+
* KEGG Reaction : R04365
−
* EC Number : 4.1.3.30
+
* EC Number : 2.3.1.117
−
{{#set: direction=REVERSIBLE}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Methylisocitrate lyase}}
+
{{#set: common name=Tetrahydrodipicolinate succinylase}}
−
{{#set: gene associated=B471_RS0101440}}
+
{{#set: in pathway=map01100|map01120|map00300|map01230}}
−
{{#set: in pathway=map00640}}
+
{{#set: reconstruction category=manual}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction source=manual-reaction_to_add_delete}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction comment=reaction added from literature evidence or biological expertise}}
−
{{#set: reconstruction source=bsubtilis}}
+

Latest revision as of 16:36, 21 March 2018

Reaction THDPS

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Tetrahydrodipicolinate succinylase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Succinyl-CoA[c] + 1.0 2,3,4,5-Tetrahydrodipicolinate[c] + 1.0 H2O H2O[c] => 1.0 Coenzyme A[c] + 1.0 N-Succinyl-2-L-amino-6-oxoheptanedioate[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:TETHYDPICSUCC-RXN
  • MetaNetX (MNX) Equation : MNXR104806
  • KEGG Reaction : R04365
  • EC Number : 2.3.1.117




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